RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 CSH1P0DML2 217 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 CSH2P0DML3 217 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 MYL4P12829 197 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 CEBPBP17676 345 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 TRIM21P19474 475 aaKnown RBP11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 PRCPP42785 496 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 MYL6P60660 151 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 FKBP3Q00688 224 aaKnown RBP11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 ARHGAP15Q53QZ3 475 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 SV2AQ7L0J3 742 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 TMC8Q8IU68 726 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 SPATA2LQ8IUW3 424 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 ADSSL1Q8N142 457 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 TTC9BQ8N6N2 239 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 CCDC150Q8NCX0 1101 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 FAM200AQ8TCP9 573 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 PLEKHO2Q8TD55 490 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 ING5Q8WYH8 240 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 FGF14Q92915 247 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 ELSPBP1Q96BH3 223 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 DHTKD1Q96HY7 919 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 FAXDC2Q96IV6 333 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 LRRC3Q9BY71 257 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 DNAI2Q9GZS0 605 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 TRPV4Q9HBA0 871 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 ZFP14Q9HCL3 533 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 EHD2Q9NZN4 543 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 UXTQ9UBK9 157 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 FBXL21Q9UKT6 434 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 SLC27A5Q9Y2P5 690 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 TRIOO75962 3097 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 KMT2EQ8IZD2 1858 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 ZNF638Q14966 1978 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 GREB1Q4ZG55 1949 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 SLC16A3O15427 465 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 ATF6P18850 670 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 ACAT1P24752 427 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 DDX6P26196 483 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 WEE1P30291 646 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 GNL1P36915 607 aaPredicted RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 PARM1Q6UWI2 310 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 ZC3H3Q8IXZ2 948 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 SMYD4Q8IYR2 804 aaPredicted RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 TRIML1Q8N9V2 468 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 OR6B3Q8NGW1 331 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 SHKBP1Q8TBC3 707 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 MYCBPAPQ8TBZ2 947 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 DEPDC1BQ8WUY9 529 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 RSAD2Q8WXG1 361 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 SMARCD2Q92925 531 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 MCRS1Q96EZ8 462 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 TRMT2BQ96GJ1 504 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 TNIP3Q96KP6 325 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 ASB16Q96NS5 453 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 MFSD1Q9H3U5 465 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 TMEM8AQ9HCN3 771 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 MAGEC2Q9UBF1 373 aaPredicted RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 GTF3C4Q9UKN8 822 aa11.12□□□□□ -0.63
SMARCA4-209ENST00000586122 ATP8B3O60423 1300 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 OBSL1O75147 1896 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 F5P12259 2224 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 MYH10P35580 1976 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 BICDL2A1A5D9 508 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 TRIM66O15016 1216 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 GADD45BO75293 160 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 MOSPD3O75425 235 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 CLSTN1O94985 981 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 ASS1P00966 412 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 CCNE1P24864 410 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 GABRR2P28476 465 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 CCR2P41597 374 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 PIK3CAP42336 1068 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 CLCN5P51795 746 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 DLG4P78352 724 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 KRT39Q6A163 491 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 SCARA3Q6AZY7 606 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 CLEC17AQ6ZS10 378 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 UNC93AQ86WB7 457 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 TTC39CQ8N584 583 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 DNASE1L2Q92874 299 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 TCEAL4Q96EI5 215 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 SHDQ96IW2 340 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 SPATA17Q96L03 361 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 MYRFLQ96LU7 910 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 CEP63Q96MT8 703 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 MRPL45Q9BRJ2 306 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 PI4K2AQ9BTU6 479 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 ELOVL4Q9GZR5 314 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 ATXN3LQ9H3M9 355 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 SLITRK6Q9H5Y7 841 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 CYP3A43Q9HB55 503 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 METTL14Q9HCE5 456 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 TMLHEQ9NVH6 421 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 OBP2AQ9NY56 170 aa11.11□□□□□ -0.63
SMARCA4-209ENST00000586122 MAN1B1Q9UKM7 699 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms