RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 COL4A2P08572 1712 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 IL18RAPO95256 599 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 ARSAP15289 507 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 CYP2F1P24903 491 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 WEE1P30291 646 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 AVPR1AP37288 418 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 BFSP1Q12934 665 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 RUNX3Q13761 415 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 PDCL2Q8N4E4 241 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 C2orf15Q8WU43 125 aaKnown RBP21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 ACCSQ96QU6 501 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 FAM83CQ9BQN1 747 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 CCDC39Q9UFE4 941 aa21.66■■□□□ 1.06
CLPTM1-204ENST00000585961 GCNT3O95395 438 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 ITGB3P05106 788 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 IDEP14735 1019 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 KCNA4P22459 653 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 CNR2P34972 360 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 SMARCB1Q12824 385 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 PTPAQ15257 358 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 FSTL4Q6MZW2 842 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 PRR23CQ6ZRP0 262 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 SV2BQ7L1I2 683 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 SYCP3Q8IZU3 236 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 RIN3Q8TB24 985 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 DNAJC19Q96DA6 116 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 CYP2S1Q96SQ9 504 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 STRA6Q9BX79 667 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 TDP1Q9NUW8 608 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 DDX43Q9NXZ2 648 aaKnown RBP21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 GTF3C4Q9UKN8 822 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 SDK1Q7Z5N4 2213 aa21.65■■□□□ 1.06
CLPTM1-204ENST00000585961 HCRTO43612 131 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 PPP1R37O75864 691 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 PAPSS2O95340 614 aaPredicted RBP21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 EGFP01133 1207 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 KRT19P08727 400 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 GALK1P51570 392 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 CASP5P51878 434 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 TSPY1Q01534 308 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 GRSF1Q12849 480 aaKnown RBP eCLIP21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 CCDC142Q17RM4 750 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 NAIF1Q69YI7 327 aaPredicted RBP21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 WDR5BQ86VZ2 330 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 C1orf127Q8N9H9 656 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 UPF2Q9HAU5 1272 aaKnown RBP21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 FBXO2Q9UK22 296 aaPredicted RBP21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 L1RE1Q9UN81 338 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 ANK1P16157 1881 aa21.64■■□□□ 1.05
CLPTM1-204ENST00000585961 HUS1O60921 280 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 CSRP2Q16527 193 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 L1TD1Q5T7N2 865 aaKnown RBP21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 CC2D1AQ6P1N0 951 aaPredicted RBP21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 MON1AQ86VX9 555 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 OSTM1Q86WC4 334 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 SYNPOQ8N3V7 929 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 CACTINQ8WUQ7 758 aaKnown RBP21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 MRPS31Q92665 395 aaKnown RBP21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 CHFRQ96EP1 664 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 ZNF560Q96MR9 790 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 FGFBP2Q9BYJ0 223 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 ARRDC1-AS1Q9H2J1 176 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 TRPC7Q9HCX4 862 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 EXOC7Q9UPT5 735 aa21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 SRPRBQ9Y5M8 271 aaKnown RBP21.63■■□□□ 1.05
CLPTM1-204ENST00000585961 SLC30A4O14863 429 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 CSH1P0DML2 217 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 CSH2P0DML3 217 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 POU5F1Q01860 360 aaKnown RBP21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 SF3A2Q15428 464 aaKnown RBP21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 TMEM196Q5HYL7 178 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 PPM1JQ5JR12 505 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 LMBRD2Q68DH5 695 aaPredicted RBP21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 SCN4BQ8IWT1 228 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 NETO1Q8TDF5 533 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 ACBD6Q9BR61 282 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 CBWD1Q9BRT8 395 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 PDE11AQ9HCR9 933 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 RBAKQ9NYW8 714 aaPredicted RBP21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 STK17AQ9UEE5 414 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 SLC8A2Q9UPR5 921 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 PCDHB13Q9Y5F0 798 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 SNX9Q9Y5X1 595 aa21.62■■□□□ 1.05
CLPTM1-204ENST00000585961 LRP3O75074 770 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 ATP2C2O75185 946 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 KRT37O76014 449 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 PRPF6O94906 941 aaKnown RBP21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 GAP43P17677 238 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 PNPLA4P41247 253 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 NFE2Q16621 373 aaPredicted RBP21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 KBTBD6Q86V97 674 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 NT5DC4Q86YG4 428 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 HVCN1Q96D96 273 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 SLC22A12Q96S37 553 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 PANK4Q9NVE7 773 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 SEL1LQ9UBV2 794 aa21.61■■□□□ 1.05
CLPTM1-204ENST00000585961 ATG2BQ96BY7 2078 aa21.6■■□□□ 1.05
CLPTM1-204ENST00000585961 TRDMT1O14717 391 aaKnown RBP21.6■■□□□ 1.05
CLPTM1-204ENST00000585961 RNF40O75150 1001 aa21.6■■□□□ 1.05
CLPTM1-204ENST00000585961 DDX6P26196 483 aaKnown RBP eCLIP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms