RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ACO1P21399 889 aaKnown RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 SAT1P21673 171 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 EDNRBP24530 442 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 PRKCIP41743 596 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 PITX1P78337 314 aaPredicted RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 SOX4Q06945 474 aaPredicted RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 MAMLD1Q13495 774 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 KIF22Q14807 665 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 ZSCAN26Q16670 478 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 FAM110CQ1W6H9 321 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 BBS9Q3SYG4 887 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 SPOUT1Q5T280 376 aaKnown RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 AFAP1L1Q8TED9 768 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 KCNK16Q96T55 309 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 NIFKQ9BYG3 293 aaKnown RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 TTC3P53804 2025 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 KIAA1217Q5T5P2 1943 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 C17orf102A2RUQ5 167 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 MICAL2O94851 1124 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 SRGAP2BP0DMP2 458 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 ICAM3P32942 547 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 RPL21P46778 160 aaKnown RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 GATMP50440 423 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 IFNL1Q8IU54 200 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 HACE1Q8IYU2 909 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 FAM71DQ8N9W8 422 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 FAM76AQ8TAV0 307 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 EPS8L3Q8TE67 593 aaKnown RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 TSPYL1Q9H0U9 437 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 C12orf65Q9H3J6 166 aaKnown RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 IL1RAPL1Q9NZN1 696 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 CPSF3Q9UKF6 684 aaKnown RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 DNPEPQ9ULA0 475 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 ST3GAL5Q9UNP4 418 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.85□□□□□ -0.67
RFFL-212ENST00000584655 PASKQ96RG2 1323 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 RNF8O76064 485 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 ASS1P00966 412 aaKnown RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 ERFP50548 548 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 PTPN11Q06124 597 aaPredicted RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 SLC29A2Q14542 456 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 KCNA10Q16322 511 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 MARCH8Q5T0T0 291 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 RASAL3Q86YV0 1011 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 TMC2Q8TDI7 906 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 OSBPL8Q9BZF1 889 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 AGO3Q9H9G7 860 aaKnown RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 UBP1Q9NZI7 540 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 MROH7Q68CQ1 1323 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 GTPBP10A4D1E9 387 aaKnown RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 PJA2O43164 708 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 ERBB2P04626 1255 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 CCT5P48643 541 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 NOMO3P69849 1222 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 GDF6Q6KF10 455 aaPredicted RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 PYROXD2Q8N2H3 581 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 PPTC7Q8NI37 304 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 USP33Q8TEY7 942 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 APOL2Q9BQE5 337 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 C2orf40Q9H1Z8 148 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 C17orf75Q9HAS0 396 aa10.85□□□□□ -0.67
RFFL-212ENST00000584655 PRDM5Q9NQX1 630 aaPredicted RBP10.85□□□□□ -0.67
RFFL-212ENST00000584655 SPTLC1O15269 473 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 FGFR1P11362 822 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 MAGOHP61326 146 aaKnown RBP10.84□□□□□ -0.67
RFFL-212ENST00000584655 MYO1EQ12965 1108 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 SNX17Q15036 470 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 MDH1BQ5I0G3 518 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 SLC13A5Q86YT5 568 aaPredicted RBP10.84□□□□□ -0.67
RFFL-212ENST00000584655 CTAGE3PQ8IX95 158 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 SCLYQ96I15 445 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 MAD1L1Q9Y6D9 718 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 DDX3YO15523 660 aaKnown RBP10.84□□□□□ -0.67
RFFL-212ENST00000584655 STRNO43815 780 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 SPAG7O75391 227 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 ECEL1O95672 775 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 CHKAP35790 457 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 OR1G1P47890 313 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 PMF1Q6P1K2 205 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 IPO4Q8TEX9 1081 aaKnown RBP10.84□□□□□ -0.67
RFFL-212ENST00000584655 RXFP2Q8WXD0 754 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 KAT2BQ92831 832 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 IQCDQ96DY2 449 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 ADAM2Q99965 735 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 KIAA1586Q9HCI6 787 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 ATG7O95352 703 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 ITGBL1O95965 494 aaPredicted RBP10.84□□□□□ -0.67
RFFL-212ENST00000584655 DNAJB2P25686 324 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 GNL1P36915 607 aaPredicted RBP10.84□□□□□ -0.67
RFFL-212ENST00000584655 ABCG1P45844 678 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 ARSEP51690 589 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 CRADDP78560 199 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 P3H1Q32P28 736 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 CCDC89Q8N998 374 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 FEZF2Q8TBJ5 459 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 KCND1Q9NSA2 647 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 GJD2Q9UKL4 321 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 MFHAS1Q9Y4C4 1052 aa10.84□□□□□ -0.67
RFFL-212ENST00000584655 TRIM17Q9Y577 477 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms