RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GPR20Q99678 358 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 KLHL14Q9P2G3 628 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 HMGXB4Q9UGU5 601 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 MROH7Q68CQ1 1323 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 MYPNQ86TC9 1320 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 MEFVO15553 781 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-217ENST00000584582 LGALS2P05162 132 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 LMNB2Q03252 620 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 DNAJC3Q13217 504 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 SETDB1Q15047 1291 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 HIF1AQ16665 826 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 QPCTQ16769 361 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 GOLGA7BQ2TAP0 167 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 KDELC2Q7Z4H8 507 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 MORC4Q8TE76 937 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 CFAP57Q96MR6 1250 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 PITPNM3Q9BZ71 974 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 AP5M1Q9H0R1 490 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 DPP3Q9NY33 737 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 RBPJLQ9UBG7 517 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 CACNG4Q9UBN1 327 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 LAMB1P07942 1786 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 CCDC195A0A1B0GUA6 201 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 MAFO75444 373 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-217ENST00000584582 FAM107AO95990 144 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 PECAM1P16284 738 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-217ENST00000584582 GBP1P32455 592 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 MXRA7P84157 204 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 PTPN11Q06124 597 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-217ENST00000584582 LRIG3Q6UXM1 1119 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 C3orf62Q6ZUJ4 267 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 WDR49Q8IV35 697 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 MAP7D3Q8IWC1 876 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 C12orf56Q8IXR9 622 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 ZDHHC14Q8IZN3 488 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 RASGEF1CQ8N431 466 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 GLIS1Q8NBF1 620 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 HASPINQ8TF76 798 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 DNAJB3Q8WWF6 145 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 PIK3R5Q8WYR1 880 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 KIF9Q9HAQ2 790 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 GOLGA2P5Q9HBQ8 144 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 LRRC4Q9HBW1 653 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 ACKR2O00590 384 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 CD48P09326 243 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 RARGP13631 454 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 SPOCD1Q6ZMY3 1216 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 RCOR2Q8IZ40 523 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 NTPCRQ9BSD7 190 aaKnown RBP11.88□□□□□ -0.51
TOP3A-217ENST00000584582 HERPUD2Q9BSE4 406 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 B3GNT5Q9BYG0 378 aa11.88□□□□□ -0.51
TOP3A-217ENST00000584582 CNOT10Q9H9A5 744 aaKnown RBP11.88□□□□□ -0.51
TOP3A-217ENST00000584582 MAFBQ9Y5Q3 323 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-217ENST00000584582 TGFB3P10600 412 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 FNTAP49354 379 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 CTCFP49711 727 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 RABGGTBP53611 331 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 CACNB2Q08289 660 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 SH3PXD2AQ5TCZ1 1133 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 RXFP2Q8WXD0 754 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 RUBCNQ92622 972 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 PCYT2Q99447 389 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 PRMT7Q9NVM4 692 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 HAUS2Q9NVX0 235 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 STRIP2Q9ULQ0 834 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 A0A0G2JND7 137 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 E5RJQ4 531 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 KITP10721 976 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 PEX5P50542 639 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 ARPP19P56211 112 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 HUNKP57058 714 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 FASTKD3Q14CZ7 662 aaKnown RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 CRELD2Q6UXH1 353 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 BBOF1Q8ND07 529 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 ADAM32Q8TC27 787 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 NT5C1AQ9BXI3 368 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 C12orf65Q9H3J6 166 aaKnown RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 ASNSD1Q9NWL6 643 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 TSPAN16Q9UKR8 245 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 NR2E3Q9Y5X4 410 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 M0QZ92 97 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 ASS1P00966 412 aaKnown RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 KRT7P08729 469 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 ARF4P18085 180 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 ABCD1P33897 745 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 ARL2P36404 184 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 SESN2P58004 480 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-217ENST00000584582 RBP5P82980 135 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 OVGP1Q12889 678 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 PTPN20Q4JDL3 420 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 CCDC91Q7Z6B0 441 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 FAM131BQ86XD5 332 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 ZNF677Q86XU0 584 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 C2orf69Q8N8R5 385 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 NDRG1Q92597 394 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms