RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-227	ENST00000583988	POLRMT	O00411	1230 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	BTN3A1	O00481	513 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PRAMEF10	O60809	474 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	KIT	P10721	976 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PIM1	P11309	404 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CXCR5	P32302	372 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	VIPR2	P41587	438 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	IFIT5	Q13325	482 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	RAB32	Q13637	225 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	UBE4A	Q14139	1066 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	HLX	Q14774	488 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CLNK	Q7Z7G1	428 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	GPR149	Q86SP6	731 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	DPP9	Q86TI2	863 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ADGRG3	Q86Y34	549 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	COLGALT2	Q8IYK4	626 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CELF5	Q8N6W0	485 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SPATA5L1	Q9BVQ7	753 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	UNKL	Q9H9P5	680 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ZNF287	Q9HBT7	754 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ETAA1	Q9NY74	926 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PTGFRN	Q9P2B2	879 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	STAP2	Q9UGK3	403 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	OGDHL	Q9ULD0	1010 aa		4.88	□□□□□ -1.63
PPP4R1-227	ENST00000583988	APAF1	O14727	1248 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TBX3	O15119	743 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PQBP1	O60828	265 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	DNAJB5	O75953	348 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	KIF20A	O95235	890 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SLC5A1	P13866	664 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	BRAF	P15056	766 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	GATA3	P23771	443 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CLK3	P49761	638 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ANXA11	P50995	505 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SUMO3	P55854	103 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	RPS7	P62081	194 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	BLOC1S1	P78537	153 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	FPGS	Q05932	587 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MPP3	Q13368	585 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ERCC6L	Q2NKX8	1250 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TAPT1	Q6NXT6	567 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	COL23A1	Q86Y22	540 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	LNX2	Q8N448	690 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SAMD3	Q8N6K7	520 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988		Q96MF0	132 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	NELL2	Q99435	816 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	HEPH	Q9BQS7	1158 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	NAA15	Q9BXJ9	866 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SMURF2	Q9HAU4	748 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	A1CF	Q9NQ94	594 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MRPS18A	Q9NVS2	196 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	AFF4	Q9UHB7	1163 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PADI4	Q9UM07	663 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TMX2	Q9Y320	296 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988	USP19	O94966	1318 aa		4.87	□□□□□ -1.63
PPP4R1-227	ENST00000583988		A0A087WWL8	130 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TRIM43B	A6NCK2	446 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MBD3L3	A6NE82	208 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MYO1C	O00159	1063 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PMM2	O15305	246 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ESRRB	O95718	433 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MAP4K4	O95819	1239 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TM4SF4	P48230	202 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PTH2R	P49190	550 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TOB1	P50616	345 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	AK2	P54819	239 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SATB1	Q01826	763 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SLC13A2	Q13183	592 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	GEN1	Q17RS7	908 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SLC30A10	Q6XR72	485 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MICALCL	Q6ZW33	695 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SDR16C5	Q8N3Y7	309 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PTCD3	Q96EY7	689 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	P2RX7	Q99572	595 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	COLEC11	Q9BWP8	271 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CASS4	Q9NQ75	786 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SERHL	Q9NQF3	203 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	XPNPEP3	Q9NQH7	507 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	INTS13	Q9NVM9	706 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TBCCD1	Q9NVR7	557 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	XPR1	Q9UBH6	696 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	HESX1	Q9UBX0	185 aa		4.86	□□□□□ -1.63
PPP4R1-227	ENST00000583988	RHPN2P1	A8MT19	583 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MASP2	O00187	686 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	VPS4B	O75351	444 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	UNC5C	O95185	931 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	IL18RAP	O95256	599 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	GRP	P07492	148 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ATXN1L	P0C7T5	689 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TYRP1	P17643	537 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MPL	P40238	635 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SLC11A2	P49281	568 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MC2R	Q01718	297 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CTBP1	Q13363	440 aa		4.85	□□□□□ -1.63
PPP4R1-227	ENST00000583988	BOP1	Q14137	746 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms