RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	CAV1	Q03135	178 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	SRSF11	Q05519	484 aa	Known RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	NOTUM	Q6P988	496 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	VPS28	Q9UK41	221 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ABCA10	Q8WWZ4	1543 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	PDZK1P1	A8MUH7	402 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	PCSK1	P29120	753 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	BFSP2	Q13515	415 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	NBPF9	Q3BBW0	867 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	SETD3	Q86TU7	594 aa	Predicted RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ATP6V0D2	Q8N8Y2	350 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	THAP11	Q96EK4	314 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	STARD7	Q9NQZ5	370 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	NOP53	Q9NZM5	478 aa	Known RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ATP10B	O94823	1461 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	TCP11X1	B4DZS4	312 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	GGCX	P38435	758 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	GMPS	P49915	693 aa	Predicted RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	EPHB3	P54753	998 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	PRKAA1	Q13131	559 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	FNDC3B	Q53EP0	1204 aa	Known RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	DPP10	Q8N608	796 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	TMEM39B	Q9GZU3	492 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	CYP39A1	Q9NYL5	469 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	CPA4	Q9UI42	421 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ZNRF3	Q9ULT6	936 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	CPD	O75976	1380 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	IFRD1	O00458	451 aa	Predicted RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	XPO1	O14980	1071 aa	Known RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ATMIN	O43313	823 aa	Predicted RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	TAP1	Q03518	808 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	EFEMP1	Q12805	493 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	LAMC2	Q13753	1193 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	TBC1D10C	Q8IV04	446 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	EME1	Q96AY2	570 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	NT5C1A	Q9BXI3	368 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	STK33	Q9BYT3	514 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ETNK1	Q9HBU6	452 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ABHD10	Q9NUJ1	306 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ABCC10	Q5T3U5	1492 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	GUCY1A3	Q02108	690 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ACTN3	Q08043	901 aa	Predicted RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	ACOX1	Q15067	660 aa		11.75	□□□□□ -0.53
MSI2-217	ENST00000583705	DBR1	Q9UK59	544 aa	Known RBP	11.75	□□□□□ -0.53
MSI2-217	ENST00000583705		A0A1W2PQ27	194 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705		A0A1W2PQ64	194 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705		A0A1W2PQD8	194 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	HSMCR30	P0CW71	290 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	PYGM	P11217	842 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	LPIN1	Q14693	890 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	TRADD	Q15628	312 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	CNGA2	Q16280	664 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	RABGAP1L	Q5R372	815 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	TRIM72	Q6ZMU5	477 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	ALKBH4	Q9NXW9	302 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	RNF14	Q9UBS8	474 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	SIK3	Q9Y2K2	1263 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	TPST1	O60507	370 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	IFNAR1	P17181	557 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	MRPL39	Q9NYK5	338 aa	Known RBP	11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	TBKBP1	A7MCY6	615 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705		M0QYT0	321 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	MSH4	O15457	936 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	PRKCE	Q02156	737 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	SNAP47	Q5SQN1	464 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	AHI1	Q8N157	1196 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	HPDL	Q96IR7	371 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	AGPAT1	Q99943	283 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	UNK	Q9C0B0	810 aa	Known RBP	11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	MGAT4D	A6NG13	374 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705		H7C4K7	107 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	CBX4	O00257	560 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	EPHB2	P29323	1055 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	EMC2	Q15006	297 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	LONRF1	Q17RB8	773 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	TTC39C	Q8N584	583 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	SCN3B	Q9NY72	215 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	MIF4GD	A9UHW6	222 aa	Known RBP	11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	EPC2	Q52LR7	807 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	C4orf33	Q8N1A6	199 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	CNBD2	Q96M20	576 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	PGLYRP2	Q96PD5	576 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	CDC25B	P30305	580 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	CTXN3	Q4LDR2	81 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	FAXC	Q5TGI0	409 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	OLFML2B	Q68BL8	750 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	NANOGNB	Q7Z5D8	188 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	KLF6	Q99612	283 aa	Predicted RBP	11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	SPRTN	Q9H040	489 aa	Predicted RBP	11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	CYP4F12	Q9HCS2	524 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	NARF	Q9UHQ1	456 aa		11.74	□□□□□ -0.53
MSI2-217	ENST00000583705	MFAP3L	O75121	409 aa		11.73	□□□□□ -0.53
MSI2-217	ENST00000583705	PPP1R18	Q6NYC8	613 aa		11.73	□□□□□ -0.53
MSI2-217	ENST00000583705	TRPC4AP	Q8TEL6	797 aa		11.73	□□□□□ -0.53
MSI2-217	ENST00000583705	RIN2	Q8WYP3	895 aa	Predicted RBP	11.73	□□□□□ -0.53
MSI2-217	ENST00000583705	TEX13B	Q9BXU2	312 aa		11.73	□□□□□ -0.53
MSI2-217	ENST00000583705	CAAP1	Q9H8G2	361 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms