RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 PRPF40AO75400 957 aaKnown RBP15.56■□□□□ 0.08
ITGB4-208ENST00000582629 F11P03951 625 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 RETP07949 1114 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 CSH1P0DML2 217 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 CSH2P0DML3 217 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 IDEP14735 1019 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 HMGA1P17096 107 aaKnown RBP15.56■□□□□ 0.08
ITGB4-208ENST00000582629 SYT1P21579 422 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 AVPR1AP37288 418 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 STAT6P42226 847 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 FNTBP49356 437 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 CASP5P51878 434 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 CEBPZQ03701 1054 aaKnown RBP15.56■□□□□ 0.08
ITGB4-208ENST00000582629 SIM2Q14190 667 aaPredicted RBP15.56■□□□□ 0.08
ITGB4-208ENST00000582629 LPAL2Q16609 132 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 FAM173BQ6P4H8 233 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 TMEM150AQ86TG1 271 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 TMEM86AQ8N2M4 240 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 LRRC52Q8N7C0 313 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 MAB21L3Q8N8X9 362 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 ZSWIM2Q8NEG5 633 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 SPATA18Q8TC71 538 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 MRPS31Q92665 395 aaKnown RBP15.56■□□□□ 0.08
ITGB4-208ENST00000582629 ACBD6Q9BR61 282 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 PI4K2AQ9BTU6 479 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 TMEM206Q9H813 350 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 KIF9Q9HAQ2 790 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 ABCB6Q9NP58 842 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 PARD6AQ9NPB6 346 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 TMLHEQ9NVH6 421 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 DDX43Q9NXZ2 648 aaKnown RBP15.56■□□□□ 0.08
ITGB4-208ENST00000582629 ITGA11Q9UKX5 1188 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 L1RE1Q9UN81 338 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 RALGAPA1Q6GYQ0 2036 aa15.56■□□□□ 0.08
ITGB4-208ENST00000582629 LRP3O75074 770 aa15.55■□□□□ 0.08
ITGB4-208ENST00000582629 GPR15P49685 360 aa15.55■□□□□ 0.08
ITGB4-208ENST00000582629 ATXN1P54253 815 aaKnown RBP15.55■□□□□ 0.08
ITGB4-208ENST00000582629 RPL10AP62906 217 aaKnown RBP15.55■□□□□ 0.08
ITGB4-208ENST00000582629 DMWDQ09019 674 aa15.55■□□□□ 0.08
ITGB4-208ENST00000582629 SPEM2Q0P670 501 aa15.55■□□□□ 0.08
ITGB4-208ENST00000582629 BFSP1Q12934 665 aa15.55■□□□□ 0.08
ITGB4-208ENST00000582629 INTS6LQ5JSJ4 861 aaKnown RBP15.55■□□□□ 0.08
ITGB4-208ENST00000582629 USP13Q92995 863 aaPredicted RBP15.55■□□□□ 0.08
ITGB4-208ENST00000582629 FAM83CQ9BQN1 747 aa15.55■□□□□ 0.08
ITGB4-208ENST00000582629 CBWD1Q9BRT8 395 aa15.55■□□□□ 0.08
ITGB4-208ENST00000582629 GKN1Q9NS71 199 aa15.55■□□□□ 0.08
ITGB4-208ENST00000582629 PANK4Q9NVE7 773 aa15.55■□□□□ 0.08
ITGB4-208ENST00000582629 UXTQ9UBK9 157 aaPredicted RBP15.55■□□□□ 0.08
ITGB4-208ENST00000582629 MAGED2Q9UNF1 606 aaPredicted RBP15.55■□□□□ 0.08
ITGB4-208ENST00000582629 GOLGA8IPA6NC78 632 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 GOLGA8JA6NMD2 632 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 HRO43593 1189 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 NOL4O94818 638 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 KRT19P08727 400 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 TMEM191BP0C7N4 346 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 HOXA6P31267 233 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 RBP5P82980 135 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 RUNX3Q13761 415 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 ZNF268Q14587 947 aaPredicted RBP15.54■□□□□ 0.08
ITGB4-208ENST00000582629 SLC39A14Q15043 492 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.54■□□□□ 0.08
ITGB4-208ENST00000582629 MON1AQ86VX9 555 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 GPD1LQ8N335 351 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 CSGALNACT2Q8N6G5 542 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 TOP6BLQ8N6T0 577 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 CXorf38Q8TB03 319 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 NOC3LQ8WTT2 800 aaKnown RBP15.54■□□□□ 0.08
ITGB4-208ENST00000582629 USP28Q96RU2 1077 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 RTKNQ9BST9 563 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 FGFBP2Q9BYJ0 223 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 HPS4Q9NQG7 708 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 TDP1Q9NUW8 608 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 GDAP2Q9NXN4 497 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 CCL26Q9Y258 94 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 SNX9Q9Y5X1 595 aa15.54■□□□□ 0.08
ITGB4-208ENST00000582629 NCOR2Q9Y618 2525 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 KIAA0391O15091 583 aaKnown RBP15.53■□□□□ 0.08
ITGB4-208ENST00000582629 PRPF6O94906 941 aaKnown RBP15.53■□□□□ 0.08
ITGB4-208ENST00000582629 ACAT1P24752 427 aaKnown RBP15.53■□□□□ 0.08
ITGB4-208ENST00000582629 PCSK1P29120 753 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 LHX1P48742 406 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 AMPD2Q01433 879 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 GRSF1Q12849 480 aaKnown RBP eCLIP15.53■□□□□ 0.08
ITGB4-208ENST00000582629 SRSF5Q13243 272 aaKnown RBP15.53■□□□□ 0.08
ITGB4-208ENST00000582629 TMEM196Q5HYL7 178 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 SDHAF4Q5VUM1 108 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 TXNDC8Q6A555 127 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 HEATR6Q6AI08 1181 aaKnown RBP15.53■□□□□ 0.08
ITGB4-208ENST00000582629 CC2D1AQ6P1N0 951 aaPredicted RBP15.53■□□□□ 0.08
ITGB4-208ENST00000582629 STXBP4Q6ZWJ1 553 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 WDR5BQ86VZ2 330 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 OSTM1Q86WC4 334 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 CCDC65Q8IXS2 484 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 STKLD1Q8NE28 680 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 TRMT2BQ96GJ1 504 aaKnown RBP15.53■□□□□ 0.08
ITGB4-208ENST00000582629 INTS4Q96HW7 963 aaKnown RBP15.53■□□□□ 0.08
ITGB4-208ENST00000582629 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 MYRFLQ96LU7 910 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 PKMYT1Q99640 499 aa15.53■□□□□ 0.08
ITGB4-208ENST00000582629 PANK2Q9BZ23 570 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms