RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 PROZP22891 400 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 U2AF2P26368 475 aaKnown RBP eCLIP8.27□□□□□ -1.093e-7■■■■□ 26.6
CCDC47-205ENST00000582331 GJA4P35212 333 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 AVPR1AP37288 418 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 MAPK8P45983 427 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 PEX3P56589 373 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 SIM1P81133 766 aaPredicted RBP8.27□□□□□ -1.09
CCDC47-205ENST00000582331 SCRN1Q12765 414 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 BFSP1Q12934 665 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 PDGFRLQ15198 375 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 SLC10A6Q3KNW5 377 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 MGAT5BQ3V5L5 792 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 TRIM61Q5EBN2 209 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 OVOS1Q6IE37 1185 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 MPZL3Q6UWV2 235 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 CHCHD4Q8N4Q1 142 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 TTC9BQ8N6N2 239 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 MAB21L3Q8N8X9 362 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 TSTD1Q8NFU3 115 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 ERMNQ8TAM6 284 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 WASF1Q92558 559 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 ZNF516Q92618 1163 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 CD101Q93033 1021 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 TNFRSF25Q93038 417 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 SEPT5Q99719 369 aaPredicted RBP8.27□□□□□ -1.09
CCDC47-205ENST00000582331 LPIN3Q9BQK8 851 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 TPSD1Q9BZJ3 242 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 TMEM60Q9H2L4 133 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 KIF9Q9HAQ2 790 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 TDP1Q9NUW8 608 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 ANKFY1Q9P2R3 1169 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 ORC3Q9UBD5 711 aaPredicted RBP8.27□□□□□ -1.09
CCDC47-205ENST00000582331 TBX20Q9UMR3 447 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 GPSM3Q9Y4H4 160 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 ADAMTS20P59510 1910 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 FREM2Q5SZK8 3169 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 WNT7AO00755 349 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 ABLIM1O14639 778 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 DTNBO60941 627 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 ZIC2O95409 532 aaPredicted RBP8.26□□□□□ -1.09
CCDC47-205ENST00000582331 LARGE1O95461 756 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 CAPNS1P04632 268 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 ENGP17813 658 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 TYMPP19971 482 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 BCKDHBP21953 392 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 MUTP22033 750 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 DDX6P26196 483 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC47-205ENST00000582331 LRPAP1P30533 357 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 NPTX2P47972 431 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 AARSP49588 968 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC47-205ENST00000582331 SPAG1Q07617 926 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 SEMA3BQ13214 749 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 COL28A1Q2UY09 1125 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 KMT5BQ4FZB7 885 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 SEZ6Q53EL9 994 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 NAIF1Q69YI7 327 aaPredicted RBP8.26□□□□□ -1.09
CCDC47-205ENST00000582331 ANO7Q6IWH7 933 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 PIP4P1Q86T03 277 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 RASSF3Q86WH2 238 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 HDDC3Q8N4P3 179 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 CPA6Q8N4T0 437 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 GIPC2Q8TF65 315 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 EZH1Q92800 747 aaPredicted RBP8.26□□□□□ -1.09
CCDC47-205ENST00000582331 USP13Q92995 863 aaPredicted RBP8.26□□□□□ -1.09
CCDC47-205ENST00000582331 ZBTB45Q96K62 511 aaPredicted RBP8.26□□□□□ -1.09
CCDC47-205ENST00000582331 BHMT2Q9H2M3 363 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 ECT2Q9H8V3 914 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 PLEKHA5Q9HAU0 1116 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 KMT5AQ9NQR1 393 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 CCL26Q9Y258 94 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 PCDHB3Q9Y5E6 796 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.26□□□□□ -1.09
CCDC47-205ENST00000582331 LOC400499M0QZD8 3231 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 ATG2BQ96BY7 2078 aa8.26□□□□□ -1.09
CCDC47-205ENST00000582331 GCN1Q92616 2671 aaKnown RBP8.26□□□□□ -1.09
CCDC47-205ENST00000582331 NUP205Q92621 2012 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 THADAQ6YHU6 1953 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 EIF4E1BA6NMX2 242 aaKnown RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 BTBD18B2RXH4 712 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 TNFRSF10BO14763 440 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 XPOTO43592 962 aaKnown RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 TOM1L1O75674 476 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 ALDH1A2O94788 518 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 F11P03951 625 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 ODC1P11926 461 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 ATF6P18850 670 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 CYP3A5P20815 502 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 MCM7P33993 719 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 GGCXP38435 758 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 DPP6P42658 865 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 ATXN3P54252 364 aaPredicted RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 NLRP12P59046 1061 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 COPS2P61201 443 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 SCAPQ12770 1279 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 NR1H3Q13133 447 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 DMP1Q13316 513 aaPredicted RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 ZBTB6Q15916 424 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms