RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	MSANTD3	Q96H12	275 aa		12.52	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	IER2	Q9BTL4	223 aa		12.52	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MTMR12	Q9C0I1	747 aa		12.52	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PDE11A	Q9HCR9	933 aa		12.52	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	GKN1	Q9NS71	199 aa		12.52	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PANK4	Q9NVE7	773 aa		12.52	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	DDX43	Q9NXZ2	648 aa	Known RBP	12.52	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	DLL3	Q9NYJ7	618 aa		12.52	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PCDHB13	Q9Y5F0	798 aa		12.52	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	HMGA1	P17096	107 aa	Known RBP	12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CYP2F1	P24903	491 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	AVPR1A	P37288	418 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PNPLA4	P41247	253 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	NLRP12	P59046	1061 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PKN3	Q6P5Z2	889 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	OSTM1	Q86WC4	334 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CMTM8	Q8IZV2	173 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CELF5	Q8N6W0	485 aa	Known RBP	12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	RIN3	Q8TB24	985 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	EBF3	Q9H4W6	596 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TRPC7	Q9HCX4	862 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	THG1L	Q9NWX6	298 aa	Known RBP	12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	OBP2A	Q9NY56	170 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SIX4	Q9UIU6	781 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	GTF3C4	Q9UKN8	822 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MTMR6	Q9Y217	621 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SNX9	Q9Y5X1	595 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CEP250	Q9BV73	2442 aa		12.51	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	OTOL1	A6NHN0	477 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114		K7ESF4	209 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	HR	O43593	1189 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	EXTL3	O43909	919 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	HUS1	O60921	280 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	F11	P03951	625 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TMEM191B	P0C7N4	346 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ARSA	P15289	507 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	GART	P22102	1010 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TGM1	P22735	817 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PXN	P49023	591 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ATXN1	P54253	815 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MLLT6	P55198	1093 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PLCB2	Q00722	1185 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	POU5F1	Q01860	360 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SMARCB1	Q12824	385 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SIM2	Q14190	667 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ITPRIPL2	Q3MIP1	535 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	DGKK	Q5KSL6	1271 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	C1orf228	Q6PIY5	440 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MAMSTR	Q6ZN01	415 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	NT5DC4	Q86YG4	428 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ADGRF2	Q8IZF7	708 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CXorf38	Q8TB03	319 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CACTIN	Q8WUQ7	758 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	USP13	Q92995	863 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	HPS4	Q9NQG7	708 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	OLFML3	Q9NRN5	406 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	POLR3B	Q9NW08	1133 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ITGA11	Q9UKX5	1188 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CDV3	Q9UKY7	258 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PTPRJ	Q12913	1337 aa		12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ZNF638	Q14966	1978 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	DENND4C	Q5VZ89	1909 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	OBSL1	O75147	1896 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	FRMD3	A2A2Y4	597 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	DCDC2B	A2VCK2	349 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TADA3	O75528	432 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LDHA	P00338	332 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CSH1	P0DML2	217 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CSH2	P0DML3	217 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	WEE1	P30291	646 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PSMC1	P62191	440 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	RBP5	P82980	135 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MYL7	Q01449	175 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LMNB2	Q03252	620 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	RUNX3	Q13761	415 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CCIN	Q13939	588 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SLC39A14	Q15043	492 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	STK38	Q15208	465 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	NFE2	Q16621	373 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	INTS6L	Q5JSJ4	861 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	NAIF1	Q69YI7	327 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LAIR1	Q6GTX8	287 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CBWD2	Q8IUF1	395 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SCN4B	Q8IWT1	228 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CCDC65	Q8IXS2	484 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	GPD1L	Q8N335	351 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	GPR161	Q8N6U8	529 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	OR5B17	Q8NGF7	314 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MRPS31	Q92665	395 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ACBD6	Q9BR61	282 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TDP1	Q9NUW8	608 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CACNA1A	O00555	2505 aa		12.49	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	STX6	O43752	255 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ATP2C2	O75185	946 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ALCAM	Q13740	583 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SOWAHA	Q2M3V2	549 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms