RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SOBPA7XYQ1 873 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 GABRDO14764 452 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 POLR2DO15514 142 aaKnown RBP22.47■■□□□ 1.19
CCDC42-203ENST00000581598 LHX1P48742 406 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 INTS6LQ5JSJ4 861 aaKnown RBP22.47■■□□□ 1.19
CCDC42-203ENST00000581598 RESP18Q5W5W9 173 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 LIMS2Q7Z4I7 341 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 FAM3CQ92520 227 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 GCNAQ96QF7 691 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 PKMYT1Q99640 499 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 CHRDQ9H2X0 955 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 TMLHEQ9NVH6 421 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 FAM13BQ9NYF5 915 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 SNX9Q9Y5X1 595 aa22.47■■□□□ 1.19
CCDC42-203ENST00000581598 PVALEFA0A1B0GWK0 134 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 TGFB1I1O43294 461 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 KRT19P08727 400 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 HMGA1P17096 107 aaKnown RBP22.46■■□□□ 1.19
CCDC42-203ENST00000581598 MYO1EQ12965 1108 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 TAF12Q16514 161 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 DUOXA2Q1HG44 320 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 ARHGAP29Q52LW3 1261 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 SCARA3Q6AZY7 606 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 CBWD2Q8IUF1 395 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 WDR49Q8IV35 697 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 OR5B17Q8NGF7 314 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 CSGALNACT1Q8TDX6 532 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 GIPC2Q8TF65 315 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 NOC3LQ8WTT2 800 aaKnown RBP22.46■■□□□ 1.19
CCDC42-203ENST00000581598 NELL1Q92832 810 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 C8orf33Q9H7E9 229 aaPredicted RBP22.46■■□□□ 1.19
CCDC42-203ENST00000581598 PRMT8Q9NR22 394 aaPredicted RBP22.46■■□□□ 1.19
CCDC42-203ENST00000581598 PTPRJQ12913 1337 aa22.46■■□□□ 1.19
CCDC42-203ENST00000581598 DPYSL4O14531 572 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 TNNC2P02585 160 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 CSH1P0DML2 217 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 CSH2P0DML3 217 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 DDX6P26196 483 aaKnown RBP eCLIP22.45■■□□□ 1.18
CCDC42-203ENST00000581598 PCSK1P29120 753 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 BMT2Q1RMZ1 405 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 SCFD1Q8WVM8 642 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 FAM84AQ96KN4 292 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 LRRC3BQ96PB8 259 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 GBP4Q96PP9 640 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 AGPAT3Q9NRZ7 376 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 RCOR1Q9UKL0 485 aa22.45■■□□□ 1.18
CCDC42-203ENST00000581598 NDRG2Q9UN36 371 aaKnown RBP22.45■■□□□ 1.18
CCDC42-203ENST00000581598 R3HCC1Q9Y3T6 440 aaKnown RBP22.45■■□□□ 1.18
CCDC42-203ENST00000581598 EP300Q09472 2414 aaPredicted RBP22.45■■□□□ 1.18
CCDC42-203ENST00000581598 PRPF40AO75400 957 aaKnown RBP22.44■■□□□ 1.18
CCDC42-203ENST00000581598 F11P03951 625 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 ME1P48163 572 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 RPL10AP62906 217 aaKnown RBP22.44■■□□□ 1.18
CCDC42-203ENST00000581598 CYP4F8P98187 520 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 PLCB2Q00722 1185 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 ZNF638Q14966 1978 aaKnown RBP22.44■■□□□ 1.18
CCDC42-203ENST00000581598 SOWAHAQ2M3V2 549 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 OTOGLQ3ZCN5 2332 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 CFAP221Q4G0U5 840 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 LMBRD2Q68DH5 695 aaPredicted RBP22.44■■□□□ 1.18
CCDC42-203ENST00000581598 TMEM150AQ86TG1 271 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 OSTM1Q86WC4 334 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 C12orf56Q8IXR9 622 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 ADGRF2Q8IZF7 708 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 ZBTB44Q8NCP5 570 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 BPIFB1Q8TDL5 484 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 FUBP3Q96I24 572 aaKnown RBP eCLIP22.44■■□□□ 1.18
CCDC42-203ENST00000581598 HPDLQ96IR7 371 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 DCHS1Q96JQ0 3298 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 PI4K2AQ9BTU6 479 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 SLC46A2Q9BY10 475 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 FAM126AQ9BYI3 521 aaPredicted RBP22.44■■□□□ 1.18
CCDC42-203ENST00000581598 SCAND2PQ9GZW5 306 aaPredicted RBP22.44■■□□□ 1.18
CCDC42-203ENST00000581598 CGNQ9P2M7 1197 aaKnown RBP22.44■■□□□ 1.18
CCDC42-203ENST00000581598 PCDHGA2Q9Y5H1 932 aa22.44■■□□□ 1.18
CCDC42-203ENST00000581598 SPTBN4Q9H254 2564 aa22.43■■□□□ 1.18
CCDC42-203ENST00000581598 TULP1O00294 542 aaPredicted RBP22.43■■□□□ 1.18
CCDC42-203ENST00000581598 PRAMEF12O95522 483 aa22.43■■□□□ 1.18
CCDC42-203ENST00000581598 NLRP12P59046 1061 aa22.43■■□□□ 1.18
CCDC42-203ENST00000581598 CSTF1Q05048 431 aaKnown RBP22.43■■□□□ 1.18
CCDC42-203ENST00000581598 MTAPQ13126 283 aa22.43■■□□□ 1.18
CCDC42-203ENST00000581598 SNRNP35Q16560 246 aaKnown RBP22.43■■□□□ 1.18
CCDC42-203ENST00000581598 FAM171BQ6P995 826 aa22.43■■□□□ 1.18
CCDC42-203ENST00000581598 CMTM8Q8IZV2 173 aa22.43■■□□□ 1.18
CCDC42-203ENST00000581598 CELF5Q8N6W0 485 aaKnown RBP22.43■■□□□ 1.18
CCDC42-203ENST00000581598 TRMT2BQ96GJ1 504 aaKnown RBP22.43■■□□□ 1.18
CCDC42-203ENST00000581598 UXTQ9UBK9 157 aaPredicted RBP22.43■■□□□ 1.18
CCDC42-203ENST00000581598 MYBPHLA2RUH7 354 aa22.42■■□□□ 1.18
CCDC42-203ENST00000581598 KINO60870 393 aaKnown RBP22.42■■□□□ 1.18
CCDC42-203ENST00000581598 NOL4O94818 638 aa22.42■■□□□ 1.18
CCDC42-203ENST00000581598 CHRNB1P11230 501 aa22.42■■□□□ 1.18
CCDC42-203ENST00000581598 ACAT1P24752 427 aaKnown RBP22.42■■□□□ 1.18
CCDC42-203ENST00000581598 CDR1P51861 262 aa22.42■■□□□ 1.18
CCDC42-203ENST00000581598 PSMD6Q15008 389 aa22.42■■□□□ 1.18
CCDC42-203ENST00000581598 HS2ST1Q7LGA3 356 aa22.42■■□□□ 1.18
CCDC42-203ENST00000581598 TRAPPC11Q7Z392 1133 aa22.42■■□□□ 1.18
CCDC42-203ENST00000581598 RALGPS2Q86X27 583 aaPredicted RBP22.42■■□□□ 1.18
CCDC42-203ENST00000581598 XXYLT1Q8NBI6 393 aa22.42■■□□□ 1.18
CCDC42-203ENST00000581598 SUMF1Q8NBK3 374 aa22.42■■□□□ 1.18
CCDC42-203ENST00000581598 MYRFLQ96LU7 910 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms