RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 RPF1Q9H9Y2 349 aaKnown RBP13.79□□□□□ -0.2
SS18-219ENST00000581570 DSEQ9UL01 958 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 MSRB2Q9Y3D2 182 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 PLS3P13797 630 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 HMGA1P17096 107 aaKnown RBP13.78□□□□□ -0.2
SS18-219ENST00000581570 BCKDHBP21953 392 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 RAD51AP2Q09MP3 1159 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 ZNF268Q14587 947 aaPredicted RBP13.78□□□□□ -0.2
SS18-219ENST00000581570 MTF1Q14872 753 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 KYAT1Q16773 422 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 C9orf57Q5W0N0 161 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 LRRTM3Q86VH5 581 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 IGSF22Q8N9C0 903 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 CCDC26Q8TAB7 109 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 FOXP1Q9H334 677 aaPredicted RBP13.78□□□□□ -0.2
SS18-219ENST00000581570 DUS2Q9NX74 493 aaKnown RBP13.78□□□□□ -0.2
SS18-219ENST00000581570 ABI2Q9NYB9 513 aaPredicted RBP13.78□□□□□ -0.2
SS18-219ENST00000581570 EVLQ9UI08 416 aaPredicted RBP13.78□□□□□ -0.2
SS18-219ENST00000581570 MAGED2Q9UNF1 606 aaPredicted RBP13.78□□□□□ -0.2
SS18-219ENST00000581570 ZZEF1O43149 2961 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 LAMA1P25391 3075 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 CITO14578 2027 aa13.78□□□□□ -0.2
SS18-219ENST00000581570 CEP295Q9C0D2 2601 aa13.77□□□□□ -0.2
SS18-219ENST00000581570 PIRO00625 290 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 CYB561D2O14569 222 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 ADRB2P07550 413 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 IFNAR2P48551 515 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 LMAN2Q12907 356 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 ENOX2Q16206 610 aaKnown RBP13.77□□□□□ -0.21
SS18-219ENST00000581570 TRIM61Q5EBN2 209 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 JADE1Q6IE81 842 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 KCNK18Q7Z418 384 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 TTC16Q8NEE8 873 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 OSCP1Q8WVF1 389 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 NUSAP1Q9BXS6 441 aaKnown RBP13.77□□□□□ -0.21
SS18-219ENST00000581570 KLK13Q9UKR3 277 aa13.77□□□□□ -0.21
SS18-219ENST00000581570 KIF26AQ9ULI4 1882 aaPredicted RBP13.77□□□□□ -0.21
SS18-219ENST00000581570 EML5Q05BV3 1969 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 TAF4O00268 1085 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 OGTO15294 1046 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 CSH1P0DML2 217 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 CSH2P0DML3 217 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 CDC25AP30304 524 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 MAPK8P45983 427 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 TRAPPC10P48553 1259 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 LIG4P49917 911 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 FAM160A1Q05DH4 1040 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 NR1H3Q13133 447 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 NBR1Q14596 966 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 RASSF3Q86WH2 238 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 CD302Q8IX05 232 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 DCP1BQ8IZD4 617 aaKnown RBP13.76□□□□□ -0.21
SS18-219ENST00000581570 USP33Q8TEY7 942 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 ATP2A3Q93084 1043 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 C8orf76Q96K31 380 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
SS18-219ENST00000581570 NOL7Q9UMY1 257 aaKnown RBP13.76□□□□□ -0.21
SS18-219ENST00000581570 PCDHB5Q9Y5E4 795 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 WNT6Q9Y6F9 365 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 ATG2BQ96BY7 2078 aa13.76□□□□□ -0.21
SS18-219ENST00000581570 SPAARA0A1B0GVQ0 90 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 ANO9A1A5B4 782 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 H0YCG3 227 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 FAM189A1O60320 539 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
SS18-219ENST00000581570 RDXP35241 583 aaKnown RBP13.75□□□□□ -0.21
SS18-219ENST00000581570 GPR15P49685 360 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 SEC13P55735 322 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 SIM1P81133 766 aaPredicted RBP13.75□□□□□ -0.21
SS18-219ENST00000581570 GNL2Q13823 731 aaKnown RBP13.75□□□□□ -0.21
SS18-219ENST00000581570 TMEM132DQ14C87 1099 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 ZRSR1Q15695 479 aaKnown RBP13.75□□□□□ -0.21
SS18-219ENST00000581570 ZNF77Q15935 545 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 EML3Q32P44 896 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 C2orf27AQ580R0 203 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 WSCD1Q658N2 575 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 LPCAT2Q7L5N7 544 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 TTC30AQ86WT1 665 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 STKLD1Q8NE28 680 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 MDGA1Q8NFP4 955 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 CYP2S1Q96SQ9 504 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 PYM1Q9BRP8 204 aaKnown RBP13.75□□□□□ -0.21
SS18-219ENST00000581570 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
SS18-219ENST00000581570 H0Y626 953 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 K7EQS6 105 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 TNFRSF10BO14763 440 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 MAP3K13O43283 966 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 TRIM16O95361 564 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 NFICP08651 508 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 ENGP17813 658 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 TAF6P49848 677 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 NCKAP1LP55160 1127 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 ANAPC15P60006 121 aa13.74□□□□□ -0.21
SS18-219ENST00000581570 CRY1Q16526 586 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms