RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 FOXN3O00409 490 aaPredicted RBP5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 ZNF185O15231 689 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 RASA4O43374 803 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 VPS4BO75351 444 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 KIF20AO95235 890 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 IL18RAPO95256 599 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 THP07101 528 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 GRPP07492 148 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 FCER1AP12319 257 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 GCSHP23434 173 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 TNFSF4P23510 183 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 BMPR1AP36894 532 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 STT3AP46977 705 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 UCP3P55916 312 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 RPS16P62249 146 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 CCDC142Q17RM4 750 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 BEAN1Q3B7T3 259 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 FAM209BQ5JX69 171 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 AGAP9Q5VTM2 703 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 TOGARAM2Q6ZUX3 1019 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 RD3Q7Z3Z2 195 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 RHOT2Q8IXI1 618 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 CCDC33Q8N5R6 958 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 DNAJC5GQ8N7S2 189 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 NSUN7Q8NE18 718 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 DDX17Q92841 729 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 NMD3Q96D46 503 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 SGCZQ96LD1 299 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 VKORC1Q9BQB6 163 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 DPH1Q9BZG8 443 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 UNKQ9C0B0 810 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 COL20A1Q9P218 1284 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 PLEKHM1Q9Y4G2 1056 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 INSL6Q9Y581 213 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 CCDC78A2IDD5 438 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 TRIM43BA6NCK2 446 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 TMEM233B4DJY2 109 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 MYO1CO00159 1063 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 NCK2O43639 380 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 CHEK2O96017 543 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 FOSP01100 380 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 PARP1P09874 1014 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 PIM1P11309 404 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 SLC11A2P49281 568 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 BLOC1S1P78537 153 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 TP53BP2Q13625 1128 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 RAB32Q13637 225 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 DAG1Q14118 895 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 AMOTQ4VCS5 1084 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 ABHD17BQ5VST6 288 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 KLHDC7AQ5VTJ3 777 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 LMBRD2Q68DH5 695 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 SYCE2Q6PIF2 218 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 C1orf228Q6PIY5 440 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 CFAP52Q8N1V2 620 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 SLC44A3Q8N4M1 653 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 OR2C3Q8N628 320 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 FAM46DQ8NEK8 389 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 VPS37AQ8NEZ2 397 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 OR56A1Q8NGH5 318 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 TRIM43Q96BQ3 446 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 ARPC5LQ9BPX5 153 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 ZSWIM1Q9BR11 485 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 TEX101Q9BY14 249 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 ZNF518BQ9C0D4 1074 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 SIK2Q9H0K1 926 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 STARD7Q9NQZ5 370 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 TMX2Q9Y320 296 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 COL4A3Q01955 1670 aa5.71□□□□□ -1.5
SMCHD1-205ENST00000581383 CDKL5O76039 1030 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 SETSIPP0DME0 302 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 TSHRP16473 764 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 ZFP36P26651 326 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 POU6F2P78424 691 aaPredicted RBP5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 SLC44A4Q53GD3 710 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 FAM160B1Q5W0V3 765 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 ARMC6Q6NXE6 501 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 FOXR2Q6PJQ5 311 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 SLC30A10Q6XR72 485 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 MICU3Q86XE3 530 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 DEPTORQ8TB45 409 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 CAGE1Q8TC20 777 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 MORC4Q8TE76 937 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 NELL1Q92832 810 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 RNF31Q96EP0 1072 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 MSLNLQ96KJ4 702 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 PNKPQ96T60 521 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 POLR3GLQ9BT43 218 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 CNPPD1Q9BV87 410 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 PLCB1Q9NQ66 1216 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 VSX1Q9NZR4 365 aaPredicted RBP5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 HSFX1Q9UBD0 423 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 CHST2Q9Y4C5 530 aa5.7□□□□□ -1.5
SMCHD1-205ENST00000581383 A0A087WWL8 130 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 A0A1B0GTW7 788 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 PIPSLA2A3N6 862 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 PYCARD-AS1I3L0S3 204 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 POLRMTO00411 1230 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 ERN1O75460 977 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms