RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 KCTD17Q8N5Z5 321 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 TFB1MQ8WVM0 346 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 FOPNLQ96NB1 174 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 ILKAPQ9H0C8 392 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 CATSPERBQ9H7T0 1116 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 DCLRE1BQ9H816 532 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 PDHBP11177 359 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 SERPINB5P36952 375 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 PPP3CCP48454 512 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 NPEPPSP55786 919 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 ZNF543Q08ER8 600 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 TRIP4Q15650 581 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 GJB7Q6PEY0 223 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 MICU2Q8IYU8 434 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 WRNIP1Q96S55 665 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 PLA2G12BQ9BX93 195 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 BBS2Q9BXC9 721 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 THAP2Q9H0W7 228 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 PRKAG2Q9UGJ0 569 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 NARFQ9UHQ1 456 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 SERPINB8P50452 374 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 RABL6Q3YEC7 729 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 ZC2HC1CQ53FD0 456 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 BNC2Q6ZN30 1099 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 SLC25A41Q8N5S1 370 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 ACTRT1Q8TDG2 376 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 CNTNAP5Q8WYK1 1306 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 CTDNEP1O95476 244 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 RAB14P61106 215 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 CACNB2Q08289 660 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 KCNMA1Q12791 1236 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 PCSK7Q16549 785 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 ENGASEQ8NFI3 743 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 ZNF512BQ96KM6 892 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 FAM84BQ96KN1 310 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 TMEM120AQ9BXJ8 343 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 RPAP3Q9H6T3 665 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 RXFP1Q9HBX9 757 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 RNF103O00237 685 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 CPB1P15086 417 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 HERVK_113P62684 666 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 CSTF3Q12996 717 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 SMTNL2Q2TAL5 461 aa15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 NSUN4Q96CB9 384 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-217ENST00000581241 GTF2H1P32780 548 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 XKR3Q5GH77 459 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 LINC00523Q86TU6 105 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 SCFD2Q8WU76 684 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 SLC39A10Q9ULF5 831 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 DPYSL4O14531 572 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 ATP9AO75110 1047 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 GPAT2Q6NUI2 795 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 TMEM143Q96AN5 459 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 CYP27B1O15528 508 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 NBNO60934 754 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 STAT5BP51692 787 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 ANTXR2P58335 489 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 EMC2Q15006 297 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 MLH1P40692 756 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 RFC5P40937 340 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 MAPRE1Q15691 268 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 CENPLQ8N0S6 344 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 GLMNQ92990 594 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 MTMR4Q9NYA4 1195 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 EVPLLA8MZ36 301 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 PLEKP08567 350 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 FDPSP14324 419 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 PTPN4P29074 926 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 FUT11Q495W5 492 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 NAPEPLDQ6IQ20 393 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 TTLL6Q8N841 843 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 ECSITQ9BQ95 431 aa15.12■□□□□ 0.01
CSNK1D-217ENST00000581241 INO80Q9ULG1 1556 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 ZCCHC18P0CG32 403 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 TBL3Q12788 808 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 JADE3Q92613 823 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 H3BQF6 201 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 FKBP6O75344 327 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 MTSS1O43312 755 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 CYP19A1P11511 503 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 FAM83EQ2M2I3 478 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 WASHC2DQ5SRD0 308 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 CYP4A22Q5TCH4 519 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 FBXO36Q8NEA4 188 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 IPMKQ8NFU5 416 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 USE1Q9NZ43 259 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 SNX9Q9Y5X1 595 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 SLC30A1Q9Y6M5 507 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 POLRMTO00411 1230 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 RGS4P49798 205 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 CDC42EP1Q00587 391 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 TP53BP2Q13625 1128 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 MAP3K14Q99558 947 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 EFCAB1Q9HAE3 211 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 DYRK4Q9NR20 520 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 ZC3H4Q9UPT8 1303 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 MADDQ8WXG6 1647 aa15.11■□□□□ 0.01
CSNK1D-217ENST00000581241 ASB14A6NK59 587 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 SNUPNO95149 360 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms