RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ADH1AP07327 375 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 CCDC172P0C7W6 258 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 KLK7P49862 253 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 RAD23BP54727 409 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 BPIFB4P59827 614 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 ERVFC1P60507 584 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 PLCB2Q00722 1185 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 LRMPQ12912 555 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 GPR17Q13304 367 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 DRAP1Q14919 205 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-203ENST00000580986 STILQ15468 1287 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 CFAP221Q4G0U5 840 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 INTS6LQ5JSJ4 861 aaKnown RBP11.08□□□□□ -0.64
CCDC47-203ENST00000580986 RRAGAQ7L523 313 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 CACNA2D4Q7Z3S7 1137 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 OSTM1Q86WC4 334 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 CEP57Q86XR8 500 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 DCP1BQ8IZD4 617 aaKnown RBP11.08□□□□□ -0.64
CCDC47-203ENST00000580986 B3GALNT2Q8NCR0 500 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 ZNF397Q8NF99 534 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-203ENST00000580986 OR6B3Q8NGW1 331 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 HDAC7Q8WUI4 952 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 BAP1Q92560 729 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 KAT5Q92993 513 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 TMEM176AQ96HP8 235 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 CEP295NLQ96MC4 621 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 PCMTD1Q96MG8 357 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-203ENST00000580986 SPAG5Q96R06 1193 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 SYT15Q9BQS2 421 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 CLSTN3Q9BQT9 956 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 ABCB6Q9NP58 842 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 IMPACTQ9P2X3 320 aa11.08□□□□□ -0.64
CCDC47-203ENST00000580986 TIMM13Q9Y5L4 95 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-203ENST00000580986 PTPRDP23468 1912 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.07□□□□□ -0.64
CCDC47-203ENST00000580986 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 ABLIM3O94929 683 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 PAPLNO95428 1278 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 ADCY5O95622 1261 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 CXCL14O95715 111 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 TPM1P09493 284 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 CNPP09543 421 aaKnown RBP11.07□□□□□ -0.64
CCDC47-203ENST00000580986 LMO2P25791 158 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 HNRNPH3P31942 346 aaKnown RBP11.07□□□□□ -0.64
CCDC47-203ENST00000580986 SOX5P35711 763 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 STAT1P42224 750 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 RAP1GAPP47736 663 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 ZBED6P86452 979 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 ROR1Q01973 937 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 APBA1Q02410 837 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 TBX2Q13207 712 aaPredicted RBP11.07□□□□□ -0.64
CCDC47-203ENST00000580986 RAPGEF1Q13905 1077 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 ARHGAP17Q68EM7 881 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 GJB7Q6PEY0 223 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 TMEM270Q6UE05 265 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 C4orf50Q6ZRC1 276 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 ZNF677Q86XU0 584 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 SLC4A11Q8NBS3 891 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 RBBP8NLQ8NC74 664 aaPredicted RBP11.07□□□□□ -0.64
CCDC47-203ENST00000580986 OR10T2Q8NGX3 314 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 ZNF461Q8TAF7 563 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 MYCBPAPQ8TBZ2 947 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 SPPL2BQ8TCT7 592 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 GDPD5Q8WTR4 605 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 B3GALT6Q96L58 329 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 AIPL1Q9NZN9 384 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 DPP7Q9UHL4 492 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 AJAP1Q9UKB5 411 aaPredicted RBP11.07□□□□□ -0.64
CCDC47-203ENST00000580986 LUC7L2Q9Y383 392 aaKnown RBP11.07□□□□□ -0.64
CCDC47-203ENST00000580986 NME7Q9Y5B8 376 aa11.07□□□□□ -0.64
CCDC47-203ENST00000580986 WDR27A2RRH5 827 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 FOXN3O00409 490 aaPredicted RBP11.06□□□□□ -0.64
CCDC47-203ENST00000580986 TEX28O15482 410 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 VDRP11473 427 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 ATF2P15336 505 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 PTPN1P18031 435 aaKnown RBP11.06□□□□□ -0.64
CCDC47-203ENST00000580986 CD58P19256 250 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 PRKCIP41743 596 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 MAGEA11P43364 429 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 FOXK1P85037 733 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 PTK2Q05397 1052 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 ARHGAP44Q17R89 818 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 LILRA6Q6PI73 481 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 PRSS55Q6UWB4 352 aaPredicted RBP11.06□□□□□ -0.64
CCDC47-203ENST00000580986 VSTM1Q6UX27 236 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 CNGA4Q8IV77 575 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 PLPP6Q8IY26 295 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 DRC7Q8IY82 874 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 ELMO3Q96BJ8 720 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 LRCH3Q96II8 777 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 KLHL5Q96PQ7 755 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 TWNKQ96RR1 684 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 DNAJC7Q99615 494 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 HNRNPABQ99729 332 aaKnown RBP11.06□□□□□ -0.64
CCDC47-203ENST00000580986 ELOVL4Q9GZR5 314 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 NSUN3Q9H649 340 aaKnown RBP11.06□□□□□ -0.64
CCDC47-203ENST00000580986 CERS4Q9HA82 394 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 PNPLA8Q9NP80 782 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 NLRC4Q9NPP4 1024 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms