RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 LMAN2Q12907 356 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 BFSP1Q12934 665 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 GPR17Q13304 367 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 VEPH1Q14D04 833 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 COL28A1Q2UY09 1125 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 TRIM61Q5EBN2 209 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 ATL3Q6DD88 541 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 CENPPQ6IPU0 288 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 ARMCX5Q6P1M9 558 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 CC2D1AQ6P1N0 951 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-210ENST00000580713 DSTYKQ6XUX3 929 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 TTC30AQ86WT1 665 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 PROSER1Q86XN7 944 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 TTC9BQ8N6N2 239 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 ACO2Q99798 780 aaKnown RBP11.65□□□□□ -0.54
TOP3A-210ENST00000580713 FAM83CQ9BQN1 747 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 POLR3CQ9BUI4 534 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-210ENST00000580713 OXCT2Q9BYC2 517 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-210ENST00000580713 KRTAP3-3Q9BYR6 98 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 KRTAP3-2Q9BYR7 98 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 TUFT1Q9NNX1 390 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 ANKFY1Q9P2R3 1169 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 GPSM3Q9Y4H4 160 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 CACNA1EQ15878 2313 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 MTMR11A4FU01 709 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 OTOL1A6NHN0 477 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-210ENST00000580713 PCNX2A6NKB5 2137 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 CCDC169A6NNP5 214 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 H0Y626 953 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 NEMFO60524 1076 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 MED24O75448 989 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 OAZ2O95190 189 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 TRIM16O95361 564 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 BCKDHBP21953 392 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 WEE1P30291 646 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 AVPR1AP37288 418 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 MLLT3P42568 568 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-210ENST00000580713 CDR1P51861 262 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 NFKBIBQ15653 356 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 NAIF1Q69YI7 327 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-210ENST00000580713 CATSPER3Q86XQ3 398 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 CMTM8Q8IZV2 173 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 TTC16Q8NEE8 873 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 TNFRSF25Q93038 417 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 SEPT5Q99719 369 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-210ENST00000580713 LPIN3Q9BQK8 851 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 SLC46A2Q9BY10 475 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 MRPL4Q9BYD3 311 aaKnown RBP11.64□□□□□ -0.55
TOP3A-210ENST00000580713 CNTN3Q9P232 1028 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 TUBGCP4Q9UGJ1 667 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 CFAP45Q9UL16 551 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 NOL7Q9UMY1 257 aaKnown RBP11.64□□□□□ -0.55
TOP3A-210ENST00000580713 ADAMTS20P59510 1910 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 NUP205Q92621 2012 aa11.64□□□□□ -0.55
TOP3A-210ENST00000580713 THADAQ6YHU6 1953 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 MCF2P10911 925 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 ATXN3P54252 364 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-210ENST00000580713 MGAT5BQ3V5L5 792 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 RILPL1Q5EBL4 403 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 OVOS1Q6IE37 1185 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 ANO7Q6IWH7 933 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 ARMCX6Q7L4S7 300 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 HDDC3Q8N4P3 179 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 MAB21L3Q8N8X9 362 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 GIPC2Q8TF65 315 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 KIFAP3Q92845 792 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 CD101Q93033 1021 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 TARS2Q9BW92 718 aaKnown RBP11.63□□□□□ -0.55
TOP3A-210ENST00000580713 SCAND2PQ9GZW5 306 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-210ENST00000580713 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
TOP3A-210ENST00000580713 EVLQ9UI08 416 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-210ENST00000580713 CCL26Q9Y258 94 aa11.63□□□□□ -0.55
TOP3A-210ENST00000580713 NUP210Q8TEM1 1887 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-210ENST00000580713 M0QZQ0 153 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 CFIP05156 583 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 ENGP17813 658 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 PTMSP20962 102 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 GJA4P35212 333 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 TRAPPC10P48553 1259 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 TUFMP49411 452 aaKnown RBP11.62□□□□□ -0.55
TOP3A-210ENST00000580713 CEBPZQ03701 1054 aaKnown RBP11.62□□□□□ -0.55
TOP3A-210ENST00000580713 SPAG1Q07617 926 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 SCAPQ12770 1279 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 MYBPC2Q14324 1141 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 PDGFRLQ15198 375 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 SEZ6Q53EL9 994 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 MPZL3Q6UWV2 235 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 LPCAT2Q7L5N7 544 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 TMEM130Q8N3G9 435 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 CPA6Q8N4T0 437 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 ERMNQ8TAM6 284 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 HNRNPLLQ8WVV9 542 aaKnown RBP11.62□□□□□ -0.55
TOP3A-210ENST00000580713 USP13Q92995 863 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-210ENST00000580713 USP28Q96RU2 1077 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 GTPBP2Q9BX10 602 aaKnown RBP11.62□□□□□ -0.55
TOP3A-210ENST00000580713 GDPD2Q9HCC8 539 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 PTPRHQ9HD43 1115 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 TDP1Q9NUW8 608 aa11.62□□□□□ -0.55
TOP3A-210ENST00000580713 GON4LQ3T8J9 2241 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms