RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 NCDNQ9UBB6 729 aa18.81■□□□□ 0.6
CSNK1D-214ENST00000580565 SIX4Q9UIU6 781 aa18.81■□□□□ 0.6
CSNK1D-214ENST00000580565 SNX9Q9Y5X1 595 aa18.81■□□□□ 0.6
CSNK1D-214ENST00000580565 MIA3Q5JRA6 1907 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 ZNF233A6NK53 670 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 F11P03951 625 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 TMEM191BP0C7N4 346 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 ACAT1P24752 427 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 CTHP32929 405 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 CXCL12P48061 93 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 GPR15P49685 360 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 AMPD3Q01432 767 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 MYL7Q01449 175 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 GAS6Q14393 721 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 INTS6LQ5JSJ4 861 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 TXNDC11Q6PKC3 985 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 TOP6BLQ8N6T0 577 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 SPATA18Q8TC71 538 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 LEO1Q8WVC0 666 aaPredicted RBP18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 RMDN1Q96DB5 314 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 PKMYT1Q99640 499 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 TRIM9Q9C026 710 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 ABCB6Q9NP58 842 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 INTS13Q9NVM9 706 aa18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 SMG5Q9UPR3 1016 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-214ENST00000580565 CUTAO60888 179 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 CSH1P0DML2 217 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 CSH2P0DML3 217 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 CYP2F1P24903 491 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 DDX6P26196 483 aaKnown RBP eCLIP18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 HOXD13P35453 343 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 AVPR1AP37288 418 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 LHX1P48742 406 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 RPL10AP62906 217 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 SATB1Q01826 763 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 TNK2Q07912 1038 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 DDR2Q16832 855 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 SOWAHAQ2M3V2 549 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 WDR44Q5JSH3 913 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 DGKKQ5KSL6 1271 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 SDHAF4Q5VUM1 108 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 LMBRD2Q68DH5 695 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 OSTM1Q86WC4 334 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 CBWD2Q8IUF1 395 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 ADGRF2Q8IZF7 708 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 SPEM1Q8N4L4 309 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 MAB21L3Q8N8X9 362 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 IQUBQ8NA54 791 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 OR5B17Q8NGF7 314 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 DHX58Q96C10 678 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 ANKRD36BP1Q96IX9 119 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 RBM12Q9NTZ6 932 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 GTF3C4Q9UKN8 822 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 MAGED2Q9UNF1 606 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 R3HCC1Q9Y3T6 440 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 GPR179Q6PRD1 2367 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 COL4A2P08572 1712 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 TSC2P49815 1807 aa18.79■□□□□ 0.6
CSNK1D-214ENST00000580565 F5P12259 2224 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 PTPRJQ12913 1337 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 OTOGLQ3ZCN5 2332 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 DMXL1Q9Y485 3027 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 SOBPA7XYQ1 873 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 GABRDO14764 452 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 YEATS4O95619 227 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 ASIC1P78348 528 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 MYO1EQ12965 1108 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 SURF1Q15526 300 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 DUOXA2Q1HG44 320 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 ITPRIPL2Q3MIP1 535 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 TXNDC8Q6A555 127 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 CNNM4Q6P4Q7 775 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 SHC4Q6S5L8 630 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 MON1AQ86VX9 555 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 STKLD1Q8NE28 680 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 USP13Q92995 863 aaPredicted RBP18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 SECISBP2LQ93073 1101 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 HPDLQ96IR7 371 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 KIAA1586Q9HCI6 787 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 GKN1Q9NS71 199 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 HSPBP1Q9NZL4 362 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 CCL26Q9Y258 94 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 SCN1AP35498 2009 aa18.78■□□□□ 0.6
CSNK1D-214ENST00000580565 DCHS1Q96JQ0 3298 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 PATJQ8NI35 1801 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 EIF3DO15371 548 aaKnown RBP eCLIP18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 HCRTO43612 131 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 NOL4O94818 638 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 TNNC2P02585 160 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 PCSK1P29120 753 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 PON2Q15165 354 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 FOXD4L5Q5VV16 416 aaPredicted RBP18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 EPM2AIP1Q7L775 607 aaPredicted RBP18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 DPH6Q7L8W6 267 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 LIMS2Q7Z4I7 341 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 SPATA2LQ8IUW3 424 aaPredicted RBP18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 ZNF507Q8TCN5 953 aa18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 FOXD4L4Q8WXT5 416 aaPredicted RBP18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 MRPS31Q92665 395 aaKnown RBP18.77■□□□□ 0.6
CSNK1D-214ENST00000580565 SNX21Q969T3 373 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms