RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 SCN4BQ8IWT1 228 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 SIX5Q8N196 739 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 SLC44A3Q8N4M1 653 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 CCDC150Q8NCX0 1101 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 FLCNQ8NFG4 579 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 PLEKHO2Q8TD55 490 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 GIPC2Q8TF65 315 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 KBTBD7Q8WVZ9 684 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 FGF14Q92915 247 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 MYLPFQ96A32 169 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 DNAJC25Q9H1X3 360 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 ABCB6Q9NP58 842 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 RAPGEFL1Q9UHV5 662 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 GTF3C4Q9UKN8 822 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 CDH9Q9ULB4 789 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 CA14Q9ULX7 337 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 HELZP42694 1942 aaKnown RBP11.66□□□□□ -0.54
NDEL1-208ENST00000580237 ANAPC1Q9H1A4 1944 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 A8MXQ7 604 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 STK25O00506 426 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 GABRDO14764 452 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 MAPK13O15264 365 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 STAU1O95793 577 aaKnown RBP11.65□□□□□ -0.54
NDEL1-208ENST00000580237 CST3P01034 146 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-208ENST00000580237 PDGFBP01127 241 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-208ENST00000580237 PDGFRBP09619 1106 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 ANXA13P27216 316 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 GABRR2P28476 465 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 CDC25CP30307 473 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 PPP1R2P41236 205 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 CCR2P41597 374 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 EPHA5P54756 1037 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 UBE2HP62256 183 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 CCDC142Q17RM4 750 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 ZCWPW2Q504Y3 356 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 DCAF17Q5H9S7 520 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-208ENST00000580237 TCERG1LQ5VWI1 586 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 ISM2Q6H9L7 571 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 KLHL10Q6JEL2 608 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 BMP8AQ7Z5Y6 402 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 DNAJB7Q7Z6W7 309 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-208ENST00000580237 TMC8Q8IU68 726 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 SHKBP1Q8TBC3 707 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 ZSCAN18Q8TBC5 510 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-208ENST00000580237 GPR152Q8TDT2 470 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 TMEM174Q8WUU8 243 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 EEF2KMTQ96G04 330 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 MRPL45Q9BRJ2 306 aaKnown RBP11.65□□□□□ -0.54
NDEL1-208ENST00000580237 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-208ENST00000580237 ATXN3LQ9H3M9 355 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 SMYD3Q9H7B4 428 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 ZFP14Q9HCL3 533 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 TMLHEQ9NVH6 421 aa11.65□□□□□ -0.54
NDEL1-208ENST00000580237 MAGED2Q9UNF1 606 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-208ENST00000580237 ATP8B3O60423 1300 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 MYBPHLA2RUH7 354 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 BIN1O00499 593 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 IKBKBO14920 756 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 STX10O60499 249 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 ATP2C2O75185 946 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 TACC1O75410 805 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 ECI2O75521 394 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 MICAL2O94851 1124 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 HLA-DRAP01903 254 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 C4BPAP04003 597 aaKnown RBP11.64□□□□□ -0.55
NDEL1-208ENST00000580237 CSH1P0DML2 217 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 CSH2P0DML3 217 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 CYP2F1P24903 491 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 GNL1P36915 607 aaPredicted RBP11.64□□□□□ -0.55
NDEL1-208ENST00000580237 RAP1GAPP47736 663 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 GCLMP48507 274 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 GPR15P49685 360 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 MXI1P50539 228 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 CLDN10P78369 228 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 PFKPQ01813 784 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 LRRC63Q05C16 580 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 SGSM1Q2NKQ1 1148 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 ZACNQ401N2 412 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 MDH1BQ5I0G3 518 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 FAM78AQ5JUQ0 283 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 GPR158Q5T848 1215 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 SV2AQ7L0J3 742 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 STKLD1Q8NE28 680 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 SMARCD2Q92925 531 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 FUBP3Q96I24 572 aaKnown RBP eCLIP11.64□□□□□ -0.55
NDEL1-208ENST00000580237 MKNK1Q9BUB5 465 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 GPR88Q9GZN0 384 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 XYLT2Q9H1B5 865 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 ZNF334Q9HCZ1 680 aaPredicted RBP11.64□□□□□ -0.55
NDEL1-208ENST00000580237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.64□□□□□ -0.55
NDEL1-208ENST00000580237 ARHGEF3Q9NR81 526 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 MAGEC2Q9UBF1 373 aaPredicted RBP11.64□□□□□ -0.55
NDEL1-208ENST00000580237 MAN1B1Q9UKM7 699 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 MUC6Q6W4X9 2439 aa11.64□□□□□ -0.55
NDEL1-208ENST00000580237 KIF26AQ9ULI4 1882 aaPredicted RBP11.63□□□□□ -0.55
NDEL1-208ENST00000580237 PATJQ8NI35 1801 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 TRIM49BA6NDI0 452 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 DPYSL4O14531 572 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 SLC16A3O15427 465 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms