RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 ME1P48163 572 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 SOX9P48436 509 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 FNTBP49356 437 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 ALCAMQ13740 583 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 CCINQ13939 588 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 E2F4Q16254 413 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 LPAL2Q16609 132 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 RESP18Q5W5W9 173 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 WDR5BQ86VZ2 330 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 CCDC26Q8TAB7 109 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 SPATA18Q8TC71 538 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 CACTINQ8WUQ7 758 aaKnown RBP14.4□□□□□ -0.1
TRAF4-214ENST00000580073 MRPS31Q92665 395 aaKnown RBP14.4□□□□□ -0.1
TRAF4-214ENST00000580073 RSPRY1Q96DX4 576 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 LOXL4Q96JB6 756 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 LPIN3Q9BQK8 851 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 MKNK1Q9BUB5 465 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 SEMA4GQ9NTN9 838 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 ABI2Q9NYB9 513 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-214ENST00000580073 GTSE1Q9NYZ3 720 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 R3HCC1Q9Y3T6 440 aaKnown RBP14.4□□□□□ -0.1
TRAF4-214ENST00000580073 STYXL1Q9Y6J8 313 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 NUP205Q92621 2012 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 K7ESF4 209 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 NRG2O14511 850 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-214ENST00000580073 PPEF2O14830 753 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 AKAP3O75969 853 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 PRAMEF12O95522 483 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 HAPLN1P10915 354 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-214ENST00000580073 GAP43P17677 238 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 ATF6P18850 670 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 ACOT2P49753 483 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 CYP4F8P98187 520 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 MYL7Q01449 175 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 SLC39A4Q6P5W5 647 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 Q6ZS52 159 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 CMTM8Q8IZV2 173 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 TMEM86AQ8N2M4 240 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 TTC9BQ8N6N2 239 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 PDILTQ8N807 584 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 C12orf50Q8NA57 414 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-214ENST00000580073 TMEM209Q96SK2 561 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 GOLPH3LQ9H4A5 285 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 ABCB6Q9NP58 842 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 PARD6AQ9NPB6 346 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 RBM12Q9NTZ6 932 aaKnown RBP14.39□□□□□ -0.11
TRAF4-214ENST00000580073 SLC8A2Q9UPR5 921 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 ATP6V1DQ9Y5K8 247 aa14.39□□□□□ -0.11
TRAF4-214ENST00000580073 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-214ENST00000580073 KPNA7A9QM74 516 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 HUS1O60921 280 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 SOAT2O75908 522 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 ADRB1P08588 477 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 TGM1P22735 817 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 NMT1P30419 496 aaKnown RBP14.38□□□□□ -0.11
TRAF4-214ENST00000580073 PDE6CP51160 858 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 RPL10AP62906 217 aaKnown RBP14.38□□□□□ -0.11
TRAF4-214ENST00000580073 GAS6Q14393 721 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 ZNF268Q14587 947 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-214ENST00000580073 PDGFRLQ15198 375 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 FBXO43Q4G163 708 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 IL31Q6EBC2 164 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 ZFYVE19Q96K21 471 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 SCAND2PQ9GZW5 306 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-214ENST00000580073 MRPL44Q9H9J2 332 aaKnown RBP14.38□□□□□ -0.11
TRAF4-214ENST00000580073 IL21Q9HBE4 155 aa14.38□□□□□ -0.11
TRAF4-214ENST00000580073 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.38□□□□□ -0.11
TRAF4-214ENST00000580073 A0A1B0GVL5 298 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 CCDC192P0DO97 292 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 DRD1P21728 446 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 LIMK1P53667 647 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 NLRP12P59046 1061 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 RUNX3Q13761 415 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 AASDHQ4L235 1098 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-214ENST00000580073 RRAGBQ5VZM2 374 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 HEATR6Q6AI08 1181 aaKnown RBP14.37□□□□□ -0.11
TRAF4-214ENST00000580073 TXNDC11Q6PKC3 985 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 CACNA2D4Q7Z3S7 1137 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 SFR1Q86XK3 245 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 CPA6Q8N4T0 437 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 FAM160A2Q8N612 972 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-214ENST00000580073 LRRC52Q8N7C0 313 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 FSIP1Q8NA03 581 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 GAB3Q8WWW8 586 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 ACDQ96AP0 544 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 ACCSQ96QU6 501 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 FIZ1Q96SL8 496 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 TMEM206Q9H813 350 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 TDP1Q9NUW8 608 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 ITGA11Q9UKX5 1188 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 HPSEQ9Y251 543 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 CACNA1BQ00975 2339 aa14.37□□□□□ -0.11
TRAF4-214ENST00000580073 NCOR2Q9Y618 2525 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 FAM237AA0A1B0GTK4 181 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 DCDC2BA2VCK2 349 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 MYMKA6NI61 221 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 ANKRD63C9JTQ0 380 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 KIAA0391O15091 583 aaKnown RBP14.36□□□□□ -0.11
TRAF4-214ENST00000580073 HRO43593 1189 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 GADD45BO75293 160 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms