RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 MAB21L3Q8N8X9 362 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 RPLP0P6Q8NHW5 317 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 USP13Q92995 863 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 C8orf76Q96K31 380 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SCNM1Q9BWG6 230 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TMEM121BQ9BXQ6 578 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SMG9Q9H0W8 520 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SLC32A1Q9H598 525 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 LARSQ9P2J5 1176 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 KALRNO60229 2985 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 OTOL1A6NHN0 477 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 SRRM3A6NNA2 597 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 SFI1A8K8P3 1242 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CSH1P0DML2 217 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CSH2P0DML3 217 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 GJA4P35212 333 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 NLRP12P59046 1061 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 LMAN2Q12907 356 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TRIM68Q6AZZ1 485 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 DCP1BQ8IZD4 617 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 C4orf32Q8N8J7 132 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TSTD1Q8NFU3 115 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 OR10T2Q8NGX3 314 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 GATA6Q92908 595 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 KCNN1Q92952 543 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CD101Q93033 1021 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ATP2A3Q93084 1043 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ECT2Q9H8V3 914 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 UXTQ9UBK9 157 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 EVLQ9UI08 416 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CCL26Q9Y258 94 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 DERAQ9Y315 318 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 NEUROG3Q9Y4Z2 214 aa13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ASH1LQ9NR48 2969 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-216ENST00000579853 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 DCLK1O15075 740 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 OGTO15294 1046 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 F11P03951 625 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 HAPLN1P10915 354 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ABCD1P33897 745 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 RDXP35241 583 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 DPP6P42658 865 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 LIG4P49917 911 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 FAM160A1Q05DH4 1040 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ENOX2Q16206 610 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 LRSAM1Q6UWE0 723 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 GIPC2Q8TF65 315 aa13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ZCCHC14Q8WYQ9 949 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 NUSAP1Q9BXS6 441 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 FBRSL1Q9HCM7 1045 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ANO9A1A5B4 782 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PIRO00625 290 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CDX4O14627 284 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PPEF2O14830 753 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ALDH1A2O94788 518 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ARSAP15289 507 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 SPINK2P20155 84 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PRPHP41219 470 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TNFSF9P41273 254 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 IFNAR2P48551 515 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 GUCY2FP51841 1108 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 NCKAP1LP55160 1127 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PSMD2Q13200 908 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MTF1Q14872 753 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 NFE2Q16621 373 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TXNDC8Q6A555 127 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 DTHD1Q6ZMT9 781 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TMEM150AQ86TG1 271 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 OSCP1Q8WVF1 389 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 HAPLN2Q9GZV7 340 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ASB7Q9H672 318 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 DUS2Q9NX74 493 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PCDHB5Q9Y5E4 795 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 APC2O95996 2303 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CELSR3Q9NYQ7 3312 aa13.18□□□□□ -0.3
CDK5RAP3-216ENST00000579853 SCN1AP35498 2009 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 H0Y626 953 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CYB561D2O14569 222 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 FAM189A1O60320 539 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TRIM16O95361 564 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PIGRP01833 764 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 USP17L7P0C7H9 530 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 HOXB3P14651 431 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 HMGA1P17096 107 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CDC25AP30304 524 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 NMT1P30419 496 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TAF6P49848 677 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TSPY1Q01534 308 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 RAD51AP2Q09MP3 1159 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TMEM132DQ14C87 1099 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 UAP1L1Q3KQV9 507 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 LMBRD2Q68DH5 695 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms