RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 NFE2Q16621 373 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DDR2Q16832 855 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CCDC142Q17RM4 750 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 INTS6LQ5JSJ4 861 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FAM26FQ5R3K3 315 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 OSTM1Q86WC4 334 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CBWD2Q8IUF1 395 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SPATA2LQ8IUW3 424 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SCN4BQ8IWT1 228 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 NELFCDQ8IXH7 590 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TMEM86AQ8N2M4 240 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CELF5Q8N6W0 485 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 IQUBQ8NA54 791 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 OR5B17Q8NGF7 314 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MRPS31Q92665 395 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SECISBP2LQ93073 1101 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MSANTD3Q96H12 275 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MMS19Q96T76 1030 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ACBD6Q9BR61 282 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SLC46A2Q9BY10 475 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 BLZF1Q9H2G9 400 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CUEDC2Q9H467 287 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TRPC7Q9HCX4 862 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 THG1LQ9NWX6 298 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 OBP2AQ9NY56 170 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 HSPBP1Q9NZL4 362 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SMG5Q9UPR3 1016 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 COL4A2P08572 1712 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TCHHQ07283 1943 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PTPRJQ12913 1337 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MYBPHLA2RUH7 354 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 KIAA0391O15091 583 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CLIC2O15247 247 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 POLR2DO15514 142 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DLATP10515 647 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TNNI1P19237 187 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PCSK1P29120 753 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CASP1P29466 404 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CTHP32929 405 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 AFMP43652 599 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CXCL12P48061 93 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ME1P48163 572 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 LHX1P48742 406 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CYP2J2P51589 502 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 NRLP54845 237 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 NLRP12P59046 1061 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PSMC1P62191 440 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 RPL10AP62906 217 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PLCB2Q00722 1185 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SATB1Q01826 763 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SURF1Q15526 300 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 E2F4Q16254 413 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 LPAL2Q16609 132 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TXNDC8Q6A555 127 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TRIM68Q6AZZ1 485 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 C1orf228Q6PIY5 440 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TXNDC11Q6PKC3 985 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SHC4Q6S5L8 630 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PRR23BQ6ZRT6 265 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 Q6ZS52 159 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 RALGPS2Q86X27 583 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CMTM8Q8IZV2 173 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ZNF687Q8N1G0 1237 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TOP6BLQ8N6T0 577 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SUMF1Q8NBK3 374 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ZBTB44Q8NCP5 570 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 LEO1Q8WVC0 666 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 HPDLQ96IR7 371 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FNBP1Q96RU3 617 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 INTS13Q9NVM9 706 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 KBTBD4Q9NVX7 518 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 GDAP2Q9NXN4 497 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FAM13BQ9NYF5 915 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SIX4Q9UIU6 781 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 RAB23Q9ULC3 237 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CCL26Q9Y258 94 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SCN1AP35498 2009 aa9.88□□□□□ -0.83
CDK5RAP3-211ENST00000578996 EIF3DO15371 548 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 F13A1P00488 732 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 F11P03951 625 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PDGFRBP09619 1106 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ZSCAN22P10073 491 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 HMGA1P17096 107 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DDX6P26196 483 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CYP27A1Q02318 531 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 GAS6Q14393 721 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SNRNP35Q16560 246 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DUOXA2Q1HG44 320 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SOWAHAQ2M3V2 549 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ITPRIPL2Q3MIP1 535 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 HEATR6Q6AI08 1181 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CC2D1AQ6P1N0 951 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 C4orf50Q6ZRC1 276 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 UNC13DQ70J99 1090 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TMEM150AQ86TG1 271 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 WDR49Q8IV35 697 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CXorf38Q8TB03 319 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 USP13Q92995 863 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SNX21Q969T3 373 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms