RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CYP2F1P24903 491 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 STAT6P42226 847 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 PXNP49023 591 aaPredicted RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 CCR3P51677 355 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 SPEM2Q0P670 501 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 PUM1Q14671 1186 aaKnown RBP eCLIP9.62□□□□□ -0.87
GGA3-207ENST00000578896 POSTNQ15063 836 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 FOXD4L6Q3SYB3 417 aaPredicted RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 SV2CQ496J9 727 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 ARHGAP29Q52LW3 1261 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 FOXD4L3Q6VB84 417 aaPredicted RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 CXorf38Q8TB03 319 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 E2F7Q96AV8 911 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 GCNAQ96QF7 691 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 C8orf33Q9H7E9 229 aaPredicted RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 DDX43Q9NXZ2 648 aaKnown RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 RBAKQ9NYW8 714 aaPredicted RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 TFIP11Q9UBB9 837 aaKnown RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 SIX4Q9UIU6 781 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 GTF3C4Q9UKN8 822 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 EXOC7Q9UPT5 735 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 PCDHB5Q9Y5E4 795 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 PTPRJQ12913 1337 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 MAP1BP46821 2468 aaKnown RBP9.61□□□□□ -0.87
GGA3-207ENST00000578896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.61□□□□□ -0.87
GGA3-207ENST00000578896 DCDC2BA2VCK2 349 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 K7ESF4 209 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 EXTL3O43909 919 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 ATP2C2O75185 946 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 ARSAP15289 507 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 PDCP20941 246 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 CDC25CP30307 473 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 TXLNAP40222 546 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 ATXN1P54253 815 aaKnown RBP9.61□□□□□ -0.87
GGA3-207ENST00000578896 NLRP12P59046 1061 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 TSPY1Q01534 308 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 SLC39A14Q15043 492 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 CCDC73Q6ZRK6 1079 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 DCP1BQ8IZD4 617 aaKnown RBP9.61□□□□□ -0.87
GGA3-207ENST00000578896 CMTM8Q8IZV2 173 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 SPEM1Q8N4L4 309 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 OR5B17Q8NGF7 314 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 SPPL2BQ8TCT7 592 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 USP13Q92995 863 aaPredicted RBP9.61□□□□□ -0.87
GGA3-207ENST00000578896 HVCN1Q96D96 273 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 CHFRQ96EP1 664 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 ZNF560Q96MR9 790 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 SLC22A12Q96S37 553 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 CYP2S1Q96SQ9 504 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 MTMR12Q9C0I1 747 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 EBF3Q9H4W6 596 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 FBRSL1Q9HCM7 1045 aaKnown RBP9.61□□□□□ -0.87
GGA3-207ENST00000578896 HPS4Q9NQG7 708 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 DLL3Q9NYJ7 618 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 HSFX1Q9UBD0 423 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 SEL1LQ9UBV2 794 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 GMEB2Q9UKD1 530 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 SNX9Q9Y5X1 595 aa9.61□□□□□ -0.87
GGA3-207ENST00000578896 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.61□□□□□ -0.87
GGA3-207ENST00000578896 GREB1Q4ZG55 1949 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 FRMD3A2A2Y4 597 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 HUS1O60921 280 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 TADA3O75528 432 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 FGF19O95750 216 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 PDGFRBP09619 1106 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 GARTP22102 1010 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 PAX3P23760 479 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 LMO2P25791 158 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 CASP1P29466 404 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 ABCD1P33897 745 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 HOXD13P35453 343 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 AVPR1AP37288 418 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 NRLP54845 237 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 PSMC1P62191 440 aaKnown RBP9.6□□□□□ -0.87
GGA3-207ENST00000578896 SIM2Q14190 667 aaPredicted RBP9.6□□□□□ -0.87
GGA3-207ENST00000578896 LRRC32Q14392 662 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 STK38Q15208 465 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 CCDC6Q16204 474 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 ITPRIPL2Q3MIP1 535 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 INTS6LQ5JSJ4 861 aaKnown RBP9.6□□□□□ -0.87
GGA3-207ENST00000578896 FSTL4Q6MZW2 842 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 RALGPS2Q86X27 583 aaPredicted RBP9.6□□□□□ -0.87
GGA3-207ENST00000578896 CBWD2Q8IUF1 395 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 SCN4BQ8IWT1 228 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 CELF5Q8N6W0 485 aaKnown RBP9.6□□□□□ -0.87
GGA3-207ENST00000578896 RDH13Q8NBN7 331 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 CACTINQ8WUQ7 758 aaKnown RBP9.6□□□□□ -0.87
GGA3-207ENST00000578896 PKMYT1Q99640 499 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 FAM83CQ9BQN1 747 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 FAM126AQ9BYI3 521 aaPredicted RBP9.6□□□□□ -0.87
GGA3-207ENST00000578896 TRPC7Q9HCX4 862 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 OBP2AQ9NY56 170 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 RAB23Q9ULC3 237 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 EML5Q05BV3 1969 aa9.6□□□□□ -0.87
GGA3-207ENST00000578896 ANTXRLA6NF34 631 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 CLIC2O15247 247 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 STX6O43752 255 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms