RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 A0A1W2PQJ5 194 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 C2orf71A6NGG8 1288 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 TEX28O15482 410 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 PTPN1P18031 435 aaKnown RBP12.92□□□□□ -0.34
IFT20-207ENST00000578547 POU3F3P20264 500 aaPredicted RBP12.92□□□□□ -0.34
IFT20-207ENST00000578547 IGFBP4P22692 258 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 NDUFV1P49821 464 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 ZBED6P86452 979 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 CYP27A1Q02318 531 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 ASIC2Q16515 512 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 INTS6LQ5JSJ4 861 aaKnown RBP12.92□□□□□ -0.34
IFT20-207ENST00000578547 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
IFT20-207ENST00000578547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.92□□□□□ -0.34
IFT20-207ENST00000578547 SLC4A11Q8NBS3 891 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 MYLIPQ8WY64 445 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 PGLYRP2Q96PD5 576 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 MED10Q9BTT4 135 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 EMILIN2Q9BXX0 1053 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 EDEM3Q9BZQ6 932 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 ZCWPW1Q9H0M4 648 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 FAM124BQ9H5Z6 455 aaPredicted RBP12.92□□□□□ -0.34
IFT20-207ENST00000578547 ACP6Q9NPH0 428 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 CRTAC1Q9NQ79 661 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.92□□□□□ -0.34
IFT20-207ENST00000578547 LMCD1Q9NZU5 365 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 GTF3C4Q9UKN8 822 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 CAPN11Q9UMQ6 739 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 BACE2Q9Y5Z0 518 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 IRAK3Q9Y616 596 aa12.92□□□□□ -0.34
IFT20-207ENST00000578547 MYBPHLA2RUH7 354 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 THAP12O43422 761 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 MFAP3LO75121 409 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 CNPP09543 421 aaKnown RBP12.91□□□□□ -0.34
IFT20-207ENST00000578547 CCDC130P13994 396 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 BRD2P25440 801 aaKnown RBP12.91□□□□□ -0.34
IFT20-207ENST00000578547 KLRC2P26717 231 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 GNA15P30679 374 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 SSTR3P32745 418 aaPredicted RBP12.91□□□□□ -0.34
IFT20-207ENST00000578547 KRT9P35527 623 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 ZNF132P52740 706 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 ADKP55263 362 aaKnown RBP12.91□□□□□ -0.34
IFT20-207ENST00000578547 ROR1Q01973 937 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
IFT20-207ENST00000578547 SFMBT2Q5VUG0 894 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 ADGRD2Q7Z7M1 963 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 SLC47A2Q86VL8 602 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 PALB2Q86YC2 1186 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 GPR65Q8IYL9 337 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 FAM71AQ8IYT1 594 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 DCP1BQ8IZD4 617 aaKnown RBP12.91□□□□□ -0.34
IFT20-207ENST00000578547 C12orf29Q8N999 325 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 MYLPFQ96A32 169 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 GAS2L1Q99501 681 aaPredicted RBP12.91□□□□□ -0.34
IFT20-207ENST00000578547 OXCT2Q9BYC2 517 aaPredicted RBP12.91□□□□□ -0.34
IFT20-207ENST00000578547 RXFP1Q9HBX9 757 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 TMLHEQ9NVH6 421 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 ABI2Q9NYB9 513 aaPredicted RBP12.91□□□□□ -0.34
IFT20-207ENST00000578547 CNTN6Q9UQ52 1028 aa12.91□□□□□ -0.34
IFT20-207ENST00000578547 ATG2AQ2TAZ0 1938 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 WDR27A2RRH5 827 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 GOLGA6L6A8MZA4 724 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 AKR1B15C9JRZ8 316 aaPredicted RBP12.9□□□□□ -0.34
IFT20-207ENST00000578547 PER2O15055 1255 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 TBC1D4O60343 1298 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 ADH1AP07327 375 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 PAEPP09466 180 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 ADORA2BP29275 332 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 CLCN1P35523 988 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 PDE6CP51160 858 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 PTK2Q05397 1052 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 GOLGA7BQ2TAP0 167 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 SGO2Q562F6 1265 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 TAF3Q5VWG9 929 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 E4F1Q66K89 784 aaPredicted RBP12.9□□□□□ -0.34
IFT20-207ENST00000578547 SLC8B1Q6J4K2 584 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 RBM23Q86U06 439 aaKnown RBP12.9□□□□□ -0.34
IFT20-207ENST00000578547 LRRTM3Q86VH5 581 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 SPATA2LQ8IUW3 424 aaPredicted RBP12.9□□□□□ -0.34
IFT20-207ENST00000578547 CNGA4Q8IV77 575 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 CRYBG2Q8N1P7 616 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 SLC2A14Q8TDB8 520 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 KLHL5Q96PQ7 755 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 PKMYT1Q99640 499 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 RHOBTB2Q9BYZ6 727 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 FNIP2Q9P278 1114 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 MYO6Q9UM54 1294 aa12.9□□□□□ -0.34
IFT20-207ENST00000578547 PRRC2BQ5JSZ5 2229 aaKnown RBP12.89□□□□□ -0.35
IFT20-207ENST00000578547 SZT2Q5T011 3432 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 CLDN5O00501 218 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 CLASP2O75122 1294 aaKnown RBP12.89□□□□□ -0.35
IFT20-207ENST00000578547 SPATA31D3P0C874 917 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 VDRP11473 427 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 FERP16591 822 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 GTF2F1P35269 517 aaKnown RBP eCLIP12.89□□□□□ -0.35
IFT20-207ENST00000578547 NRIP1P48552 1158 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 BPIFB4P59827 614 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 MAPRE1Q15691 268 aaKnown RBP12.89□□□□□ -0.35
IFT20-207ENST00000578547 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms