RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 PTPN20Q4JDL3 420 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 LCLAT1Q6UWP7 414 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 FAM43BQ6ZT52 329 aaPredicted RBP13.92□□□□□ -0.18
CTC1-203ENST00000578240 DPH6Q7L8W6 267 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 NPAS4Q8IUM7 802 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 CRYBG2Q8N1P7 616 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 DDX27Q96GQ7 796 aaKnown RBP13.92□□□□□ -0.18
CTC1-203ENST00000578240 NAPGQ99747 312 aaPredicted RBP13.92□□□□□ -0.18
CTC1-203ENST00000578240 LHX5Q9H2C1 402 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 NRDE2Q9H7Z3 1164 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 L2HGDHQ9H9P8 463 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 PRDM5Q9NQX1 630 aaPredicted RBP13.92□□□□□ -0.18
CTC1-203ENST00000578240 MARCH5Q9NX47 278 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 TSPAN16Q9UKR8 245 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 ZMYND8Q9ULU4 1186 aaPredicted RBP13.92□□□□□ -0.18
CTC1-203ENST00000578240 A8MXQ7 604 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 TMEM189-UBE2V1I3L0A0 370 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 M0QYV0 167 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 TULP2O00295 520 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 NCK2O43639 380 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 BUB1BO60566 1050 aaPredicted RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 ATP2C2O75185 946 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 B3GAT3O94766 335 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 CYP11A1P05108 521 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 CCDC130P13994 396 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 ACAT1P24752 427 aaKnown RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 CASQ1P31415 396 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 NSFP46459 744 aaKnown RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 PSMC1P62191 440 aaKnown RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 GPC5P78333 572 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 DEFB103AP81534 67 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 CNGA2Q16280 664 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 GOLGA7BQ2TAP0 167 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 SLFN11Q7Z7L1 901 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 URGCPQ8TCY9 931 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 RSPH1Q8WYR4 309 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 HEXIM2Q96MH2 286 aaKnown RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 CPXM1Q96SM3 734 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 TLR10Q9BXR5 811 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 TRIM7Q9C029 511 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 CRTAC1Q9NQ79 661 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 AVENQ9NQS1 362 aaPredicted RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 CNOT8Q9UFF9 292 aaKnown RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 PCDHB7Q9Y5E2 793 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 MED7O43513 233 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 FTCDO95954 541 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 PDGFRBP09619 1106 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 GNL1P36915 607 aaPredicted RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 ARHGAP17Q68EM7 881 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 MFSD5Q6N075 450 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 TMCO2Q7Z6W1 182 aaPredicted RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 TMEM173Q86WV6 379 aaPredicted RBP13.91□□□□□ -0.18
CTC1-203ENST00000578240 SUSD3Q96L08 255 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 NUP85Q9BW27 656 aa13.91□□□□□ -0.18
CTC1-203ENST00000578240 CHD9Q3L8U1 2897 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
CTC1-203ENST00000578240 GABBR2O75899 941 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 GJB6O95452 261 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 FAM163BP0C2L3 166 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 PBX3P40426 434 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 PDCLQ13371 301 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 PTPROQ16827 1216 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 PAPD7Q5XG87 772 aaKnown RBP13.9□□□□□ -0.18
CTC1-203ENST00000578240 PLEKHA7Q6IQ23 1121 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 DCLRE1AQ6PJP8 1040 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 PAQR9Q6ZVX9 377 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 C16orf59Q7L2K0 433 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 PHLDB2Q86SQ0 1253 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 RHOT2Q8IXI1 618 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 TMEM86AQ8N2M4 240 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 B3GALNT2Q8NCR0 500 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 TMEM35BQ8NCS4 154 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 LRRN4CLQ8ND94 238 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 UBA3Q8TBC4 463 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 ZNF564Q8TBZ8 553 aaPredicted RBP13.9□□□□□ -0.18
CTC1-203ENST00000578240 BCL7CQ8WUZ0 217 aaPredicted RBP13.9□□□□□ -0.18
CTC1-203ENST00000578240 BTBD6Q96KE9 485 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 ALS2CR12Q96Q35 445 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 PKMYT1Q99640 499 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 ZNF518BQ9C0D4 1074 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 PDCL3Q9H2J4 239 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 SNX25Q9H3E2 840 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 ABCB6Q9NP58 842 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 DDX43Q9NXZ2 648 aaKnown RBP13.9□□□□□ -0.18
CTC1-203ENST00000578240 ADAM22Q9P0K1 906 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 KANSL3Q9P2N6 904 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 KIAA1257Q9ULG3 409 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 PACSIN2Q9UNF0 486 aaPredicted RBP13.9□□□□□ -0.18
CTC1-203ENST00000578240 PRG3Q9Y2Y8 225 aaPredicted RBP13.9□□□□□ -0.18
CTC1-203ENST00000578240 MRFAP1Q9Y605 127 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 OBSL1O75147 1896 aa13.9□□□□□ -0.18
CTC1-203ENST00000578240 CTAGE9A4FU28 777 aa13.89□□□□□ -0.19
CTC1-203ENST00000578240 TBKBP1A7MCY6 615 aa13.89□□□□□ -0.19
CTC1-203ENST00000578240 DGKIO75912 1065 aa13.89□□□□□ -0.19
CTC1-203ENST00000578240 ERBB2P04626 1255 aa13.89□□□□□ -0.19
CTC1-203ENST00000578240 ACRP10323 421 aa13.89□□□□□ -0.19
CTC1-203ENST00000578240 RAG1P15918 1043 aa13.89□□□□□ -0.19
CTC1-203ENST00000578240 SYN1P17600 705 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms