RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
CCDC57-211ENST00000578187 TRIML1Q8N9V2 468 aa13.71□□□□□ -0.21
CCDC57-211ENST00000578187 DNASE1L2Q92874 299 aa13.71□□□□□ -0.21
CCDC57-211ENST00000578187 DHTKD1Q96HY7 919 aaPredicted RBP13.71□□□□□ -0.21
CCDC57-211ENST00000578187 TSG101Q99816 390 aa13.71□□□□□ -0.21
CCDC57-211ENST00000578187 MKNK1Q9BUB5 465 aa13.71□□□□□ -0.21
CCDC57-211ENST00000578187 GPR88Q9GZN0 384 aa13.71□□□□□ -0.21
CCDC57-211ENST00000578187 SLITRK6Q9H5Y7 841 aa13.71□□□□□ -0.21
CCDC57-211ENST00000578187 SPATA6Q9NWH7 488 aaPredicted RBP13.71□□□□□ -0.21
CCDC57-211ENST00000578187 KIAA1468Q9P260 1216 aa13.71□□□□□ -0.21
CCDC57-211ENST00000578187 DOCK6Q96HP0 2047 aa13.71□□□□□ -0.22
CCDC57-211ENST00000578187 NOTCH4Q99466 2003 aa13.71□□□□□ -0.22
CCDC57-211ENST00000578187 TRIM49BA6NDI0 452 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 FAM170BA6NMN3 283 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 BIN1O00499 593 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 LAMTOR5O43504 91 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 FGF19O95750 216 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 STAU1O95793 577 aaKnown RBP13.7□□□□□ -0.22
CCDC57-211ENST00000578187 LMNAP02545 664 aaKnown RBP13.7□□□□□ -0.22
CCDC57-211ENST00000578187 MYL4P12829 197 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 CCNE1P24864 410 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 PSMC2P35998 433 aaKnown RBP13.7□□□□□ -0.22
CCDC57-211ENST00000578187 DLG4P78352 724 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 MYO1EQ12965 1108 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 CAMK4Q16566 473 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 PRSS36Q5K4E3 855 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 C1orf220Q5T0J3 134 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 ANKRD40Q6AI12 368 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 ISM2Q6H9L7 571 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 TPRG1Q6ZUI0 275 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 INTS8Q75QN2 995 aaKnown RBP13.7□□□□□ -0.22
CCDC57-211ENST00000578187 METTL23Q86XA0 190 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 FAM186BQ8IYM0 893 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 SPATA18Q8TC71 538 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 IRF7Q92985 503 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 E2F7Q96AV8 911 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 HPDLQ96IR7 371 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 DDX23Q9BUQ8 820 aaKnown RBP13.7□□□□□ -0.22
CCDC57-211ENST00000578187 TRMT61BQ9BVS5 477 aaKnown RBP13.7□□□□□ -0.22
CCDC57-211ENST00000578187 BRD9Q9H8M2 597 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 L1RE1Q9UN81 338 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 YIPF1Q9Y548 306 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
CCDC57-211ENST00000578187 PPP1R3GB7ZBB8 358 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 MAN2B1O00754 1011 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 IKBKBO14920 756 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 CETN3O15182 167 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 HUS1O60921 280 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 C4BPAP04003 597 aaKnown RBP13.69□□□□□ -0.22
CCDC57-211ENST00000578187 VAMP7P51809 220 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 FKBP3Q00688 224 aaKnown RBP13.69□□□□□ -0.22
CCDC57-211ENST00000578187 GPR17Q13304 367 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 ZACNQ401N2 412 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
CCDC57-211ENST00000578187 TANGO2Q6ICL3 276 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 LIMS2Q7Z4I7 341 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 ITIH5Q86UX2 942 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 THEM5Q8N1Q8 247 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 TMEM86AQ8N2M4 240 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 PDCL2Q8N4E4 241 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 TOP6BLQ8N6T0 577 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 OR10T2Q8NGX3 314 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 DEPDC1BQ8WUY9 529 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 SMARCD2Q92925 531 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 ASB16Q96NS5 453 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 PGLYRP2Q96PD5 576 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 HINFPQ9BQA5 517 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 XYLT2Q9H1B5 865 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 NUP62CLQ9H1M0 184 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 LTB4R2Q9NPC1 389 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 DLGAP2Q9P1A6 1054 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 R3HCC1Q9Y3T6 440 aaKnown RBP13.69□□□□□ -0.22
CCDC57-211ENST00000578187 ASB3Q9Y575 518 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 SNX9Q9Y5X1 595 aa13.69□□□□□ -0.22
CCDC57-211ENST00000578187 GOLGA6L22H0YM25 854 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 SLC16A3O15427 465 aaKnown RBP13.68□□□□□ -0.22
CCDC57-211ENST00000578187 VNN2O95498 520 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
CCDC57-211ENST00000578187 OR4Q2P0C623 313 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 SP9P0CG40 484 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 EPB41P11171 864 aaKnown RBP13.68□□□□□ -0.22
CCDC57-211ENST00000578187 KRT13P13646 458 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 PSMC3P17980 439 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 ATICP31939 592 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 EPHA5P54756 1037 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 DUSP4Q13115 394 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 PPP2R5DQ14738 602 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 ARHGAP15Q53QZ3 475 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 FAM78AQ5JUQ0 283 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 TTI2Q6NXR4 508 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 DPH6Q7L8W6 267 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 YAF2Q8IY57 180 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 FAM200AQ8TCP9 573 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 GPT2Q8TD30 523 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 TCEAL4Q96EI5 215 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 TMEM209Q96SK2 561 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 ZCWPW1Q9H0M4 648 aa13.68□□□□□ -0.22
CCDC57-211ENST00000578187 VRTNQ9H8Y1 702 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms