RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 TRPV2Q9Y5S1 764 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 CDY2AQ9Y6F7 541 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 GOLGA8SH3BPF8 625 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 PODXLO00592 558 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 KRT3P12035 628 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 ZNF268Q14587 947 aaPredicted RBP29.27■■■□□ 2.28
LIMD2-203ENST00000578067 LLGL1Q15334 1064 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 LCLAT1Q6UWP7 414 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 XYLT1Q86Y38 959 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 CCDC50Q8IVM0 306 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 SMG8Q8ND04 991 aaKnown RBP29.27■■■□□ 2.28
LIMD2-203ENST00000578067 F8VP50 259 aa29.26■■■□□ 2.27
LIMD2-203ENST00000578067 ERBB2P04626 1255 aa29.26■■■□□ 2.27
LIMD2-203ENST00000578067 GABRB2P47870 512 aa29.26■■■□□ 2.27
LIMD2-203ENST00000578067 STILQ15468 1287 aa29.26■■■□□ 2.27
LIMD2-203ENST00000578067 KCTD19Q17RG1 926 aaPredicted RBP29.26■■■□□ 2.27
LIMD2-203ENST00000578067 LRRC38Q5VT99 294 aa29.26■■■□□ 2.27
LIMD2-203ENST00000578067 DPH6Q7L8W6 267 aa29.26■■■□□ 2.27
LIMD2-203ENST00000578067 CCDC105Q8IYK2 499 aa29.26■■■□□ 2.27
LIMD2-203ENST00000578067 TRIM31Q9BZY9 425 aa29.26■■■□□ 2.27
LIMD2-203ENST00000578067 PIRO00625 290 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 HSF2BPO75031 334 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 ADAMTS4O75173 837 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 GJC1P36383 396 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 DRG2P55039 364 aaKnown RBP29.25■■■□□ 2.27
LIMD2-203ENST00000578067 FAM193AP78312 1265 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 PDCLQ13371 301 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 TWF2Q6IBS0 349 aaKnown RBP29.25■■■□□ 2.27
LIMD2-203ENST00000578067 XPNPEP3Q9NQH7 507 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 SCN10AQ9Y5Y9 1956 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 RFC1P35251 1148 aaPredicted RBP29.25■■■□□ 2.27
LIMD2-203ENST00000578067 HSPA9P38646 679 aaKnown RBP29.25■■■□□ 2.27
LIMD2-203ENST00000578067 FAM47CQ5HY64 1035 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 UBA3Q8TBC4 463 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 TSPAN16Q9UKR8 245 aa29.25■■■□□ 2.27
LIMD2-203ENST00000578067 CYP3A5P20815 502 aa29.24■■■□□ 2.27
LIMD2-203ENST00000578067 HERPUD2Q9BSE4 406 aa29.24■■■□□ 2.27
LIMD2-203ENST00000578067 RALAP11233 206 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 TERF2Q15554 542 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 FBXO47Q5MNV8 452 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 SERINC5Q86VE9 423 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 RCOR2Q8IZ40 523 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 FNIP1Q8TF40 1166 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 SCN1AP35498 2009 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 AOC2O75106 756 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 CETN2P41208 172 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 PNPLA4P41247 253 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 CAP1Q01518 475 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 UNC93AQ86WB7 457 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 C12orf29Q8N999 325 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 JOSD2Q8TAC2 188 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 C1orf54Q8WWF1 131 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 MCRS1Q96EZ8 462 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 ZNF560Q96MR9 790 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 OSBPL8Q9BZF1 889 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 FAN1Q9Y2M0 1017 aa29.23■■■□□ 2.27
LIMD2-203ENST00000578067 TCF4P15884 667 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 PSMA2P25787 234 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 CCND3P30281 292 aaPredicted RBP29.22■■■□□ 2.27
LIMD2-203ENST00000578067 SP3Q02447 781 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 KLF1Q13351 362 aaPredicted RBP29.22■■■□□ 2.27
LIMD2-203ENST00000578067 SOWAHAQ2M3V2 549 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 CFAP58Q5T655 872 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 ACOT1Q86TX2 421 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 IQCKQ8N0W5 287 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 ARRDC4Q8NCT1 418 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 LRRC45Q96CN5 670 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 RBM41Q96IZ5 413 aaKnown RBP29.22■■■□□ 2.27
LIMD2-203ENST00000578067 VPS18Q9P253 973 aa29.22■■■□□ 2.27
LIMD2-203ENST00000578067 PDCD11Q14690 1871 aaKnown RBP29.22■■■□□ 2.27
LIMD2-203ENST00000578067 RPS6KA5O75582 802 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 KCNJ1P48048 391 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 ATP13A4Q4VNC1 1196 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 SESTD1Q86VW0 696 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 IPO4Q8TEX9 1081 aaKnown RBP29.21■■■□□ 2.27
LIMD2-203ENST00000578067 RIN2Q8WYP3 895 aaPredicted RBP29.21■■■□□ 2.27
LIMD2-203ENST00000578067 SLCO2A1Q92959 643 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 WNT8BQ93098 351 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 HEMGNQ9BXL5 484 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 METTL5Q9NRN9 209 aaKnown RBP29.21■■■□□ 2.27
LIMD2-203ENST00000578067 ST3GAL5Q9UNP4 418 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 KPNA7A9QM74 516 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 ASGR1P07306 291 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 GOLGA7BQ2TAP0 167 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 PPP1R26Q5T8A7 1209 aaPredicted RBP29.21■■■□□ 2.27
LIMD2-203ENST00000578067 OR6B3Q8NGW1 331 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 RNF25Q96BH1 459 aaPredicted RBP29.21■■■□□ 2.27
LIMD2-203ENST00000578067 ZIM3Q96PE6 472 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 RUFY1Q96T51 708 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 MIS12Q9H081 205 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 HOMER3Q9NSC5 361 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 RNF186Q9NXI6 227 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 GDAP2Q9NXN4 497 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 SNX24Q9Y343 169 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 NME7Q9Y5B8 376 aa29.21■■■□□ 2.27
LIMD2-203ENST00000578067 RNF40O75150 1001 aa29.2■■■□□ 2.27
LIMD2-203ENST00000578067 ECEL1O95672 775 aa29.2■■■□□ 2.27
LIMD2-203ENST00000578067 RPLP2P05387 115 aaKnown RBP29.2■■■□□ 2.27
LIMD2-203ENST00000578067 PRKAR2AP13861 404 aaKnown RBP29.2■■■□□ 2.27
LIMD2-203ENST00000578067 SOX4Q06945 474 aaPredicted RBP29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms