RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 BUB1BO60566 1050 aaPredicted RBP19.66■□□□□ 0.74
PRKCA-203ENST00000578063 PDGFRBP09619 1106 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 LMO2P25791 158 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 GOLGA7BQ2TAP0 167 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 PPP1R26Q5T8A7 1209 aaPredicted RBP19.66■□□□□ 0.74
PRKCA-203ENST00000578063 CD300LGQ6UXG3 332 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 UBE2Q2Q8WVN8 375 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 CASD1Q96PB1 797 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 HESX1Q9UBX0 185 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 CDC23Q9UJX2 597 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 SAR1BQ9Y6B6 198 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 KIAA0100Q14667 2235 aaKnown RBP19.66■□□□□ 0.74
PRKCA-203ENST00000578063 CAPN15O75808 1086 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 KIF4AO95239 1232 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 FTCDO95954 541 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 CYP11A1P05108 521 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 SETSIPP0DME0 302 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 RAG1P15918 1043 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 PRLRP16471 622 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 GPD2P43304 727 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 MEI1Q5TIA1 1274 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 PLEKHA7Q6IQ23 1121 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 METTL23Q86XA0 190 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 B3GALNT2Q8NCR0 500 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 SUSD3Q96L08 255 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 FAM49BQ9NUQ9 324 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 DDX43Q9NXZ2 648 aaKnown RBP19.65■□□□□ 0.74
PRKCA-203ENST00000578063 SNX12Q9UMY4 172 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 HYOU1Q9Y4L1 999 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 TET1Q8NFU7 2136 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 ABHD14A-ACY1A0A1B0GW23 586 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 TRIM43BA6NCK2 446 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 HCRTO43612 131 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 B4GALT3O60512 393 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 PFKMP08237 780 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 PDCLQ13371 301 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 PTPN20Q4JDL3 420 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 PAN2Q504Q3 1202 aaKnown RBP19.65■□□□□ 0.74
PRKCA-203ENST00000578063 PEX26Q7Z412 305 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 UBE2Q1Q7Z7E8 422 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 TMEM199Q8N511 208 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 TRIM43Q96BQ3 446 aaPredicted RBP19.65■□□□□ 0.74
PRKCA-203ENST00000578063 TLR10Q9BXR5 811 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 MIS12Q9H081 205 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 PARVAQ9NVD7 372 aa19.65■□□□□ 0.74
PRKCA-203ENST00000578063 TTC3P53804 2025 aa19.64■□□□□ 0.74
PRKCA-203ENST00000578063 EFCAB14O75071 495 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 TCP1P17987 556 aaKnown RBP19.64■□□□□ 0.73
PRKCA-203ENST00000578063 TYMPP19971 482 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 PCSK1P29120 753 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 BRCC3P46736 316 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 OR1G1P47890 313 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 GSCP56915 257 aaPredicted RBP19.64■□□□□ 0.73
PRKCA-203ENST00000578063 PKDCCQ504Y2 493 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 C2CD6Q53TS8 623 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 MFSD5Q6N075 450 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 LRRC43Q8N309 656 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 IPO4Q8TEX9 1081 aaKnown RBP19.64■□□□□ 0.73
PRKCA-203ENST00000578063 HASPINQ8TF76 798 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 VWCEQ96DN2 955 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 ABCB6Q9NP58 842 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 WDR35Q9P2L0 1181 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 CHORDC1Q9UHD1 332 aaPredicted RBP19.64■□□□□ 0.73
PRKCA-203ENST00000578063 CYTH4Q9UIA0 394 aa19.64■□□□□ 0.73
PRKCA-203ENST00000578063 PTPN1P18031 435 aaKnown RBP19.63■□□□□ 0.73
PRKCA-203ENST00000578063 EN2P19622 333 aaPredicted RBP19.63■□□□□ 0.73
PRKCA-203ENST00000578063 TERF1P54274 439 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 BCAT1P54687 386 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 MAMLD1Q13495 774 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 WHAMMP3Q1A5X7 153 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 TTC30AQ86WT1 665 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 C3orf20Q8ND61 904 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 UBA3Q8TBC4 463 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 SYT15Q9BQS2 421 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 GOLPH3Q9H4A6 298 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 SYNCQ9H7C4 482 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 NRDE2Q9H7Z3 1164 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 ANAPC7Q9UJX3 599 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 AMFRQ9UKV5 643 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 CDH9Q9ULB4 789 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 PCDHB8Q9UN66 801 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 TIMM13Q9Y5L4 95 aaPredicted RBP19.63■□□□□ 0.73
PRKCA-203ENST00000578063 MICAL3Q7RTP6 2002 aa19.63■□□□□ 0.73
PRKCA-203ENST00000578063 TBKBP1A7MCY6 615 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 I3L4J1 428 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 TRAPPC3O43617 180 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 NCK2O43639 380 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 ITGB1P05556 798 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 CCDC130P13994 396 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 ITGB8P26012 769 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 GABRB2P47870 512 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 GATMP50440 423 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 PSMC1P62191 440 aaKnown RBP19.62■□□□□ 0.73
PRKCA-203ENST00000578063 TAP1Q03518 808 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 RPS6KA1Q15418 735 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 DNAJC24Q6P3W2 148 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.62■□□□□ 0.73
PRKCA-203ENST00000578063 NT5DC3Q86UY8 548 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 ANKRD52Q8NB46 1076 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 MYRIPQ8NFW9 859 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms