RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 O00370 1275 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 OAZ2O95190 189 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 TUBB4AP04350 444 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 CYP1A1P04798 512 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 ITGB1P05556 798 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 CALB1P05937 261 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 FGFR3P22607 806 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 CDH5P33151 784 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 MAGEA10P43363 369 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 KRT17Q04695 432 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 GOLGA7BQ2TAP0 167 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 USP41Q3LFD5 358 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 INTS6LQ5JSJ4 861 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 LIN9Q5TKA1 542 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 RASIP1Q5U651 963 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 FAM171A1Q5VUB5 890 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 LCLAT1Q6UWP7 414 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 C4orf50Q6ZRC1 276 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 GPR65Q8IYL9 337 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 SLC39A11Q8N1S5 342 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 ACRBPQ8NEB7 543 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 RABGGTAQ92696 567 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 VCPIP1Q96JH7 1222 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 SAMD11Q96NU1 681 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 TWNKQ96RR1 684 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 TTPALQ9BTX7 342 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 HERC2P3Q9BVR0 1158 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 CXXC1Q9P0U4 656 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 TSPAN16Q9UKR8 245 aa14.09□□□□□ -0.15
CDK5RAP3-205ENST00000577802 ANKRD62A6NC57 917 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 I3L4J1 428 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 SOD2P04179 222 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 URODP06132 367 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 PDGFRBP09619 1106 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 TMEM253P0C7T8 217 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 CHRNB2P17787 502 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 PTPN1P18031 435 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 TKTP29401 623 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 NOMO3P69849 1222 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 PLCB3Q01970 1234 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 BST2Q10589 180 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 NFE2Q16621 373 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 VARS2Q5ST30 1063 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 ACAD10Q6JQN1 1059 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 KIAA1841Q6NSI8 718 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 CD300LGQ6UXG3 332 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 OSTM1Q86WC4 334 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 MYCBPAPQ8TBZ2 947 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 C2orf15Q8WU43 125 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 CLP1Q92989 425 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 CYFIP2Q96F07 1278 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 SMARCD1Q96GM5 515 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 PPP1R13BQ96KQ4 1090 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 MED10Q9BTT4 135 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 PLVAPQ9BX97 442 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 UBE2OQ9C0C9 1292 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 ISCUQ9H1K1 167 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 SYNCQ9H7C4 482 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 CYLDQ9NQC7 956 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 FAM49BQ9NUQ9 324 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 MYO1AQ9UBC5 1043 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 LCMT1Q9UIC8 334 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 NENFQ9UMX5 172 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 SCINQ9Y6U3 715 aa14.08□□□□□ -0.16
CDK5RAP3-205ENST00000577802 A0A0A6YYK5 440 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 BTNL10A8MVZ5 291 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 PJA2O43164 708 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 MICAL2O94851 1124 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 FAM200BP0CF97 657 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 UNGP13051 313 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 GLUD2P49448 558 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 PSMC1P62191 440 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 CYP27A1Q02318 531 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 ORC1Q13415 861 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 CTXN3Q4LDR2 81 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 MDH1BQ5I0G3 518 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 NAA35Q5VZE5 725 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 DDX53Q86TM3 631 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 CEP57Q86XR8 500 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 PHF13Q86YI8 300 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 PASD1Q8IV76 773 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 RHOT2Q8IXI1 618 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 TFAP2BQ92481 460 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 FUBP3Q96I24 572 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 ALS2CR12Q96Q35 445 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 HNRNPABQ99729 332 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 DPEP3Q9H4B8 488 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 ACP6Q9NPH0 428 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 WDR35Q9P2L0 1181 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 GTF3C4Q9UKN8 822 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 TIMM13Q9Y5L4 95 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 NCANO14594 1321 aa14.07□□□□□ -0.16
CDK5RAP3-205ENST00000577802 NLRC5Q86WI3 1866 aa14.06□□□□□ -0.16
CDK5RAP3-205ENST00000577802 F8W810 466 aa14.06□□□□□ -0.16
CDK5RAP3-205ENST00000577802 KIF5CO60282 957 aa14.06□□□□□ -0.16
CDK5RAP3-205ENST00000577802 FTLP02792 175 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-205ENST00000577802 CPB1P15086 417 aa14.06□□□□□ -0.16
CDK5RAP3-205ENST00000577802 ACAT1P24752 427 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-205ENST00000577802 LMO2P25791 158 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms