RNA–Protein interactions for RNA: ENST00000577699.6

AP003028.1-201, humanhuman

TSL 5 BASIC

Gene AP003028.1, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003028.1-201ENST00000577699 HMGA1P17096 107 aaKnown RBP12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 TXLNAP40222 546 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 TFAMQ00059 246 aaKnown RBP12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 L1TD1Q5T7N2 865 aaKnown RBP12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 PRR23CQ6ZRP0 262 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 USP49Q70CQ1 688 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 CEP68Q76N32 757 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 WDR5BQ86VZ2 330 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 BRSK2Q8IWQ3 736 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 MAB21L3Q8N8X9 362 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 LEO1Q8WVC0 666 aaPredicted RBP12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 USP13Q92995 863 aaPredicted RBP12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 FAM213AQ9BRX8 229 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 STRA6Q9BX79 667 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 ABCB6Q9NP58 842 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 CCL26Q9Y258 94 aa12.17□□□□□ -0.46
AP003028.1-201ENST00000577699 ZNF638Q14966 1978 aaKnown RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 SLC30A4O14863 429 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 F11P03951 625 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 ITGB3P05106 788 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 CSH1P0DML2 217 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 CSH2P0DML3 217 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 PDCP20941 246 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 POLR2BP30876 1174 aaKnown RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 AMPD2Q01433 879 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 KCNA1Q09470 495 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 GRSF1Q12849 480 aaKnown RBP eCLIP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 RUNX3Q13761 415 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 ZNF268Q14587 947 aaPredicted RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 TMEM196Q5HYL7 178 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 MON1AQ86VX9 555 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 TMEM86AQ8N2M4 240 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 FAM160A2Q8N612 972 aaPredicted RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 LRRC52Q8N7C0 313 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 CACTINQ8WUQ7 758 aaKnown RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 MRPS31Q92665 395 aaKnown RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 SAAL1Q96ER3 474 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 ACCSQ96QU6 501 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 ACBD6Q9BR61 282 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 PI4K2AQ9BTU6 479 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 EBF3Q9H4W6 596 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 HPS4Q9NQG7 708 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 OLFML3Q9NRN5 406 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 GKN1Q9NS71 199 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 TDP1Q9NUW8 608 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 TMLHEQ9NVH6 421 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 RBAKQ9NYW8 714 aaPredicted RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 FBXO2Q9UK22 296 aaPredicted RBP12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 ITGA11Q9UKX5 1188 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 L1RE1Q9UN81 338 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 SPAG17Q6Q759 2223 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 RALGAPA1Q6GYQ0 2036 aa12.16□□□□□ -0.46
AP003028.1-201ENST00000577699 MAP1BP46821 2468 aaKnown RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 CCDC163A0A0D9SF12 145 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 MYMKA6NI61 221 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 TRDMT1O14717 391 aaKnown RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 EXTL3O43909 919 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 HUS1O60921 280 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 ATG13O75143 517 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 PRPF40AO75400 957 aaKnown RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 GCNT3O95395 438 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 GARTP22102 1010 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 WNT7BP56706 349 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 RPL10AP62906 217 aaKnown RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 MYL7Q01449 175 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 ALCAMQ13740 583 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 PDGFRLQ15198 375 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 INTS6LQ5JSJ4 861 aaKnown RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 RRAGBQ5VZM2 374 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 TXNDC8Q6A555 127 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 FSTL4Q6MZW2 842 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 SV2BQ7L1I2 683 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 C1orf127Q8N9H9 656 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 SPATA18Q8TC71 538 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 GAB3Q8WWW8 586 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 DNAJC19Q96DA6 116 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 TRMT2BQ96GJ1 504 aaKnown RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 CNTNAP3BQ96NU0 1288 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 CNTNAP3Q9BZ76 1288 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 DDX43Q9NXZ2 648 aaKnown RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 TBC1D7Q9P0N9 293 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 UXTQ9UBK9 157 aaPredicted RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 MAGED2Q9UNF1 606 aaPredicted RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 AGAP1Q9UPQ3 857 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 PCDHB13Q9Y5F0 798 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 SRPRBQ9Y5M8 271 aaKnown RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 CLIC4Q9Y696 253 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 CNOT1A5YKK6 2376 aaKnown RBP12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 GREB1Q4ZG55 1949 aa12.15□□□□□ -0.46
AP003028.1-201ENST00000577699 USP24Q9UPU5 2620 aa12.14□□□□□ -0.47
AP003028.1-201ENST00000577699 OTOL1A6NHN0 477 aaPredicted RBP12.14□□□□□ -0.47
AP003028.1-201ENST00000577699 TULP1O00294 542 aaPredicted RBP12.14□□□□□ -0.47
AP003028.1-201ENST00000577699 RPP40O75818 363 aaKnown RBP12.14□□□□□ -0.47
AP003028.1-201ENST00000577699 NOL4O94818 638 aa12.14□□□□□ -0.47
AP003028.1-201ENST00000577699 LDHAP00338 332 aaKnown RBP12.14□□□□□ -0.47
AP003028.1-201ENST00000577699 ADRB1P08588 477 aa12.14□□□□□ -0.47
AP003028.1-201ENST00000577699 ACAT1P24752 427 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms