RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 ALDH9A1P49189 494 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 MAP2K6P52564 334 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 PROSER3Q2NL68 480 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 MTX3Q5HYI7 312 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 ICE2Q659A1 982 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 SFRP4Q6FHJ7 346 aaPredicted RBP3.43□□□□□ -1.86
CDH8-204ENST00000577536 ANKRD16Q6P6B7 361 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 TMEM108Q6UXF1 575 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.43□□□□□ -1.86
CDH8-204ENST00000577536 FAM46DQ8NEK8 389 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 REPS1Q96D71 796 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 FAM167AQ96KS9 214 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 SLC46A1Q96NT5 459 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 LMBRD1Q9NUN5 540 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 CACNA1IQ9P0X4 2223 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 H0YIZ8 118 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 ZNF213O14771 459 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 SLC16A3O15427 465 aaKnown RBP3.42□□□□□ -1.86
CDH8-204ENST00000577536 TLR5O60602 858 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 POU2F2P09086 479 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 ITGB6P18564 788 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 KELP23276 732 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 CYP2C18P33260 490 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 ZNF134P52741 427 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 LONRF3Q496Y0 759 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 SLC44A4Q53GD3 710 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 AARS2Q5JTZ9 985 aaKnown RBP3.42□□□□□ -1.86
CDH8-204ENST00000577536 TMEM240Q5SV17 173 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 EMC10Q5UCC4 262 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 ZNF626Q68DY1 528 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 SLC29A4Q7RTT9 530 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 MAVSQ7Z434 540 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 ZNF804AQ7Z570 1209 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 Q8N9P0 234 aaPredicted RBP3.42□□□□□ -1.86
CDH8-204ENST00000577536 FANCBQ8NB91 859 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 PNPOQ9NVS9 261 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 DLL3Q9NYJ7 618 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 SH3BP4Q9P0V3 963 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 HESX1Q9UBX0 185 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 SH2B3Q9UQQ2 575 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 PCDHA1Q9Y5I3 950 aa3.42□□□□□ -1.86
CDH8-204ENST00000577536 TISP43B9A030 160 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 QSOX1O00391 747 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 DCLK1O15075 740 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 DNAJB5O75953 348 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 ATXN1LP0C7T5 689 aaKnown RBP3.41□□□□□ -1.86
CDH8-204ENST00000577536 NHLRC4P0CG21 123 aaPredicted RBP3.41□□□□□ -1.86
CDH8-204ENST00000577536 CERS1P27544 350 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 EPHB2P29323 1055 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 PPIFP30405 207 aaKnown RBP3.41□□□□□ -1.86
CDH8-204ENST00000577536 LIPAP38571 399 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 CLCN2P51788 898 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 EEFSECP57772 596 aaKnown RBP3.41□□□□□ -1.86
CDH8-204ENST00000577536 LOXL3P58215 753 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 NKX6-1P78426 367 aaPredicted RBP3.41□□□□□ -1.86
CDH8-204ENST00000577536 EXOSC9Q06265 439 aaKnown RBP3.41□□□□□ -1.86
CDH8-204ENST00000577536 PGS1Q32NB8 556 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 TREML2Q5T2D2 321 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 LAYNQ6UX15 382 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 ZNF66Q6ZN08 573 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 WDR53Q7Z5U6 358 aaPredicted RBP3.41□□□□□ -1.86
CDH8-204ENST00000577536 CATIPQ7Z7H3 387 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 NEK8Q86SG6 692 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 BRIX1Q8TDN6 353 aaKnown RBP3.41□□□□□ -1.86
CDH8-204ENST00000577536 TTYH3Q9C0H2 523 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 NRIP3Q9NQ35 241 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 SSX2IPQ9Y2D8 614 aa3.41□□□□□ -1.86
CDH8-204ENST00000577536 H3BUI4 141 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 SMIM22K7EJ46 135 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 TP73O15350 636 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 UNC5CO95185 931 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 IL33O95760 270 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 ONECUT2O95948 504 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 IL6RP08887 468 aaPredicted RBP3.4□□□□□ -1.87
CDH8-204ENST00000577536 HDCP19113 662 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 MPGP29372 298 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 PXNP49023 591 aaPredicted RBP3.4□□□□□ -1.87
CDH8-204ENST00000577536 LILRA4P59901 499 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 TUBA4AP68366 448 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 SP2Q02086 613 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 KLF9Q13886 244 aaPredicted RBP3.4□□□□□ -1.87
CDH8-204ENST00000577536 PLS1Q14651 629 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 IQCB1Q15051 598 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 CCDC157Q569K6 752 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 PRAMEF17Q5VTA0 474 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 MORN5Q5VZ52 161 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 C11orf87Q6NUJ2 197 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 YTHDF3Q7Z739 585 aaKnown RBP3.4□□□□□ -1.87
CDH8-204ENST00000577536 ZNF366Q8N895 744 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 C9orf106Q8NAJ2 232 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 PCSK9Q8NBP7 692 aaKnown RBP3.4□□□□□ -1.87
CDH8-204ENST00000577536 HSPBAP1Q96EW2 488 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 PTDSS2Q9BVG9 487 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 GTPBP4Q9BZE4 634 aaKnown RBP3.4□□□□□ -1.87
CDH8-204ENST00000577536 PCDH12Q9NPG4 1184 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 DUSP22Q9NRW4 184 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 SERTAD3Q9UJW9 196 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 BTBD3Q9Y2F9 522 aa3.4□□□□□ -1.87
CDH8-204ENST00000577536 LUC7L2Q9Y383 392 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms