RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 KLRC4O43908 158 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 NUCB2P80303 420 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 BIRC3Q13489 604 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 ANGPT1Q15389 498 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 MAPRE1Q15691 268 aaKnown RBP16.62■□□□□ 0.25
SF3B3-215ENST00000577085 ZNF852Q6ZMS4 543 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 C4orf50Q6ZRC1 276 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 KIAA0895Q8NCT3 520 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 LRRC3Q9BY71 257 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 BCO2Q9BYV7 579 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 TRPV4Q9HBA0 871 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 GDPD2Q9HCC8 539 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 ABCB6Q9NP58 842 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 TMLHEQ9NVH6 421 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 FRMD4BQ9Y2L6 1034 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 MUC6Q6W4X9 2439 aa16.62■□□□□ 0.25
SF3B3-215ENST00000577085 FAM170BA6NMN3 283 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 HEPACAM2A8MVW5 462 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 NRG2O14511 850 aaPredicted RBP16.61■□□□□ 0.25
SF3B3-215ENST00000577085 NCAM2O15394 837 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 CSH1P0DML2 217 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 CSH2P0DML3 217 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 AP3M2P53677 418 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 WDR72Q3MJ13 1102 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 STXBP5Q5T5C0 1151 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 SCARA3Q6AZY7 606 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 POTEHQ6S545 545 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 VITQ6UXI7 678 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 KRBA2Q6ZNG9 492 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 GAREM2Q75VX8 874 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 ARID3BQ8IVW6 561 aaPredicted RBP16.61■□□□□ 0.25
SF3B3-215ENST00000577085 MFSD6LQ8IWD5 586 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 SCN4BQ8IWT1 228 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 CSGALNACT1Q8TDX6 532 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 SYAP1Q96A49 352 aaPredicted RBP16.61■□□□□ 0.25
SF3B3-215ENST00000577085 NELL2Q99435 816 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 SYT15Q9BQS2 421 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 HEBP1Q9NRV9 189 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 ZMYM5Q9UJ78 669 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 CDH9Q9ULB4 789 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 ZDBF2Q9HCK1 2354 aa16.61■□□□□ 0.25
SF3B3-215ENST00000577085 FAM237AA0A1B0GTK4 181 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 PDXKO00764 312 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 GABRDO14764 452 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 ZNF202O95125 648 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 NR3C1P04150 777 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 PDGFRBP09619 1106 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 CD72P21854 359 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 CYP2F1P24903 491 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 PSMC1P62191 440 aaKnown RBP16.6■□□□□ 0.25
SF3B3-215ENST00000577085 CYP4F8P98187 520 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 CYP27A1Q02318 531 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 CEP135Q66GS9 1140 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 OSTM1Q86WC4 334 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 GPIHBP1Q8IV16 184 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 OR6B3Q8NGW1 331 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 FUBP3Q96I24 572 aaKnown RBP eCLIP16.6■□□□□ 0.25
SF3B3-215ENST00000577085 PHOX2BQ99453 314 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 TASP1Q9H6P5 420 aa16.6■□□□□ 0.25
SF3B3-215ENST00000577085 MAGEC2Q9UBF1 373 aaPredicted RBP16.6■□□□□ 0.25
SF3B3-215ENST00000577085 UXTQ9UBK9 157 aaPredicted RBP16.6■□□□□ 0.25
SF3B3-215ENST00000577085 NXF1Q9UBU9 619 aaKnown RBP16.6■□□□□ 0.25
SF3B3-215ENST00000577085 MYBPHLA2RUH7 354 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 MAN2B1O00754 1011 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 CST3P01034 146 aaPredicted RBP16.59■□□□□ 0.25
SF3B3-215ENST00000577085 PRR29P0C7W0 189 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 WARSP23381 471 aaKnown RBP16.59■□□□□ 0.25
SF3B3-215ENST00000577085 ANXA13P27216 316 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 ATICP31939 592 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 GNL1P36915 607 aaPredicted RBP16.59■□□□□ 0.25
SF3B3-215ENST00000577085 AVPR1AP37288 418 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 CASP4P49662 377 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 GPR15P49685 360 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 DDR2Q16832 855 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 CFAP221Q4G0U5 840 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 SLC9A9Q8IVB4 645 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 MRPS31Q92665 395 aaKnown RBP16.59■□□□□ 0.25
SF3B3-215ENST00000577085 DDX23Q9BUQ8 820 aaKnown RBP16.59■□□□□ 0.25
SF3B3-215ENST00000577085 OSBPL6Q9BZF3 934 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 LTB4R2Q9NPC1 389 aa16.59■□□□□ 0.25
SF3B3-215ENST00000577085 SPATA6Q9NWH7 488 aaPredicted RBP16.59■□□□□ 0.25
SF3B3-215ENST00000577085 THG1LQ9NWX6 298 aaKnown RBP16.59■□□□□ 0.25
SF3B3-215ENST00000577085 HCRTO43612 131 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 RHOBTB3O94955 611 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 LMO2P25791 158 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 DDX6P26196 483 aaKnown RBP eCLIP16.58■□□□□ 0.24
SF3B3-215ENST00000577085 RPL13P26373 211 aaKnown RBP16.58■□□□□ 0.24
SF3B3-215ENST00000577085 GRIK1P39086 918 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 MAGEA9P43362 315 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 KPNA1P52294 538 aaPredicted RBP16.58■□□□□ 0.24
SF3B3-215ENST00000577085 MYL6P60660 151 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 DPYDQ12882 1025 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 ZNF699Q32M78 642 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 SDHAF4Q5VUM1 108 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 C1orf210Q8IVY1 113 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 PARD3BQ8TEW8 1205 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 KBTBD7Q8WVZ9 684 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 MYLPFQ96A32 169 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 KCTD10Q9H3F6 313 aa16.58■□□□□ 0.24
SF3B3-215ENST00000577085 GOLPH3LQ9H4A5 285 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms