RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 LTB4R2Q9NPC1 389 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 MAGED2Q9UNF1 606 aaPredicted RBP12.77□□□□□ -0.37
LITAF-219ENST00000576334 PCDHB5Q9Y5E4 795 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 R4GN57 208 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 DENND4CQ5VZ89 1909 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 NUP210Q8TEM1 1887 aaPredicted RBP12.76□□□□□ -0.37
LITAF-219ENST00000576334 GABRDO14764 452 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
LITAF-219ENST00000576334 GFRA3O60609 400 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 TNNC2P02585 160 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 PSMC3P17980 439 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 TUFMP49411 452 aaKnown RBP12.76□□□□□ -0.37
LITAF-219ENST00000576334 KRT85P78386 507 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 TSPY1Q01534 308 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 FZD5Q13467 585 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 PSMD6Q15008 389 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 KNOP1Q1ED39 458 aaKnown RBP12.76□□□□□ -0.37
LITAF-219ENST00000576334 LIMS2Q7Z4I7 341 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 DCP1BQ8IZD4 617 aaKnown RBP12.76□□□□□ -0.37
LITAF-219ENST00000576334 XXYLT1Q8NBI6 393 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 LEMD2Q8NC56 503 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 RIN3Q8TB24 985 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 CGRRF1Q99675 332 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 ACBD6Q9BR61 282 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 MRPL45Q9BRJ2 306 aaKnown RBP12.76□□□□□ -0.37
LITAF-219ENST00000576334 TRPV4Q9HBA0 871 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 CRTAC1Q9NQ79 661 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 NDRG2Q9UN36 371 aaKnown RBP12.76□□□□□ -0.37
LITAF-219ENST00000576334 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 ASB3Q9Y575 518 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 PATJQ8NI35 1801 aa12.76□□□□□ -0.37
LITAF-219ENST00000576334 SLC38A8A6NNN8 435 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 ARNTLO00327 626 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 EXOC3O60645 756 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 UBE4BO95155 1302 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 RPN1P04843 607 aaKnown RBP12.75□□□□□ -0.37
LITAF-219ENST00000576334 NBL1P41271 181 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 SYKP43405 635 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 MYL6P60660 151 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 DLG4P78352 724 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 PFKPQ01813 784 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 PRKCQQ04759 706 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 VEPH1Q14D04 833 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 WDR44Q5JSH3 913 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 TXNDC8Q6A555 127 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 HS2ST1Q7LGA3 356 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 ITIH5Q86UX2 942 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 MFSD6LQ8IWD5 586 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 ZNF687Q8N1G0 1237 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 TMEM86AQ8N2M4 240 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 TOP6BLQ8N6T0 577 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 FSIP1Q8NA03 581 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 SHDQ96IW2 340 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 FNBP1Q96RU3 617 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 MMS19Q96T76 1030 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 KCTD10Q9H3F6 313 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 DPEP3Q9H4B8 488 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 EXOC1Q9NV70 894 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 HSFX1Q9UBD0 423 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 CCL26Q9Y258 94 aa12.75□□□□□ -0.37
LITAF-219ENST00000576334 F5P12259 2224 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 ZNF638Q14966 1978 aaKnown RBP12.74□□□□□ -0.37
LITAF-219ENST00000576334 PRR23AA6NEV1 266 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 LRRIQ3A6PVS8 624 aaPredicted RBP12.74□□□□□ -0.37
LITAF-219ENST00000576334 ZNF263O14978 683 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 TADA3O75528 432 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 F11P03951 625 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 HOXC13P31276 330 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 RAP1GAPP47736 663 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 NLRP12P59046 1061 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 MYL7Q01449 175 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 TNK2Q07912 1038 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 MYO1EQ12965 1108 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 SURF1Q15526 300 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 TAF12Q16514 161 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 FAM171BQ6P995 826 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 TSSK4Q6SA08 328 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 C1orf210Q8IVY1 113 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 SCN4BQ8IWT1 228 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 C12orf56Q8IXR9 622 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 MAB21L3Q8N8X9 362 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 C2orf15Q8WU43 125 aaKnown RBP12.74□□□□□ -0.37
LITAF-219ENST00000576334 IRF7Q92985 503 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 MYLPFQ96A32 169 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 SLC22A12Q96S37 553 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 SYT15Q9BQS2 421 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 TASP1Q9H6P5 420 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 KIAA1586Q9HCI6 787 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.37
LITAF-219ENST00000576334 TMEM30AQ9NV96 361 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 DMAC2Q9NW81 257 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 SPATA6Q9NWH7 488 aaPredicted RBP12.74□□□□□ -0.37
LITAF-219ENST00000576334 GTSE1Q9NYZ3 720 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 PIAS3Q9Y6X2 628 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 PTPRDP23468 1912 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 GREB1Q4ZG55 1949 aa12.74□□□□□ -0.37
LITAF-219ENST00000576334 ANAPC1Q9H1A4 1944 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 PROB1E7EW31 1015 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms