RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 NCOA5Q9HCD5 579 aaKnown RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 TUFT1Q9NNX1 390 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 FSCN3Q9NQT6 498 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 TUBGCP4Q9UGJ1 667 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 SUSD2Q9UGT4 822 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 CCL26Q9Y258 94 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 TIMM13Q9Y5L4 95 aaPredicted RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 AKAP13Q12802 2813 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 ARID2Q68CP9 1835 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 NUP210Q8TEM1 1887 aaPredicted RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 TCRBV21S2A2A0A5A6 115 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 NEMFO60524 1076 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 HARSP12081 509 aaKnown RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 ATF6P18850 670 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 CYP11B2P19099 503 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 PAX3P23760 479 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 PDIA3P30101 505 aaKnown RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 NMT1P30419 496 aaKnown RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 LRPAP1P30533 357 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 USP4Q13107 963 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 DMP1Q13316 513 aaPredicted RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 ZNF77Q15935 545 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 SLC39A12Q504Y0 691 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 LARP1BQ659C4 914 aaKnown RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 PADI6Q6TGC4 694 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 MPZL3Q6UWV2 235 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 LRRC69Q6ZNQ3 347 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 TMPRSS7Q7RTY8 843 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 GLRX5Q86SX6 157 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 RASEFQ8IZ41 740 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 FBXL16Q8N461 479 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 CCDC33Q8N5R6 958 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 ERMNQ8TAM6 284 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 SPPL2BQ8TCT7 592 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 C2orf15Q8WU43 125 aaKnown RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 HMGB4Q8WW32 186 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 JAKMIP1Q96N16 626 aaKnown RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 CAMK1GQ96NX5 476 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 PNMA5Q96PV4 448 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 ACO2Q99798 780 aaKnown RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 ZDHHC5Q9C0B5 715 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 FAM124BQ9H5Z6 455 aaPredicted RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 TMEM206Q9H813 350 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 IL21Q9HBE4 155 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 BRMS1Q9HCU9 246 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 KIAA1522Q9P206 1035 aaPredicted RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 UXTQ9UBK9 157 aaPredicted RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 UBQLN1Q9UMX0 589 aaKnown RBP6.39□□□□□ -1.39
SMG6-219ENST00000575663 KCNJ14Q9UNX9 436 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 WNT6Q9Y6F9 365 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 SPAG17Q6Q759 2223 aa6.39□□□□□ -1.39
SMG6-219ENST00000575663 TRAV19A0A0A6YYK7 116 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 A0A1W2PQD8 194 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 CCDC169A6NNP5 214 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 E9PAM4 449 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 ZBTB24O43167 697 aaPredicted RBP6.38□□□□□ -1.39
SMG6-219ENST00000575663 CDKL5O76039 1030 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 KLF8O95600 359 aaPredicted RBP6.38□□□□□ -1.39
SMG6-219ENST00000575663 CKMP06732 381 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 USP17L7P0C7H9 530 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 CSH1P0DML2 217 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 CSH2P0DML3 217 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 CPA1P15085 419 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 GNSP15586 552 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 CYP3A5P20815 502 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 RPS6KB1P23443 525 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 PSMA5P28066 241 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 TXKP42681 527 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 AARSP49588 968 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMG6-219ENST00000575663 PDE6CP51160 858 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 NLRP12P59046 1061 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 PPP2R3AQ06190 1150 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 ZNF33AQ06730 810 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 CYP4F3Q08477 520 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 NBR1Q14596 966 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 NOLC1Q14978 699 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMG6-219ENST00000575663 EML3Q32P44 896 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 MAP7D1Q3KQU3 841 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 PLEKHG6Q3KR16 790 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 SYCP2LQ5T4T6 812 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 HAUS3Q68CZ6 603 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 TXNDC8Q6A555 127 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 TMEM92Q6UXU6 159 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 TRMT11Q7Z4G4 463 aaKnown RBP6.38□□□□□ -1.39
SMG6-219ENST00000575663 MON1AQ86VX9 555 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 EFCAB13Q8IY85 973 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 RGL4Q8IZJ4 473 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 ZNF843Q8N446 348 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 ALLCQ8N6M5 410 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 TXNDC5Q8NBS9 432 aaKnown RBP6.38□□□□□ -1.39
SMG6-219ENST00000575663 ENGASEQ8NFI3 743 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 OR2I1PQ8NGU4 316 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 RIN3Q8TB24 985 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 SPATA18Q8TC71 538 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 GIPC2Q8TF65 315 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 CRELD1Q96HD1 420 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 AIFM3Q96NN9 605 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 FCRL3Q96P31 734 aaPredicted RBP6.38□□□□□ -1.39
SMG6-219ENST00000575663 PI4K2AQ9BTU6 479 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 AGXT2Q9BYV1 514 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms