RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 KIF9Q9HAQ2 790 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 KCND2Q9NZV8 630 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 CPSF3Q9UKF6 684 aaKnown RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 DSEQ9UL01 958 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 EML5Q05BV3 1969 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 ANKRD11Q6UB99 2663 aaPredicted RBP10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 NPHP3-ACAD11A0A0J9YXS1 232 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 H0YCG3 227 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 CYB561D2O14569 222 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 CDX4O14627 284 aaPredicted RBP10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 APBB3O95704 486 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 NFICP08651 508 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 CEACAM1P13688 526 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 HOXB3P14651 431 aaPredicted RBP10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 SCP2P22307 547 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 LIG4P49917 911 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 BFSP1Q12934 665 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 DMC1Q14565 340 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 PDGFRLQ15198 375 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 TAF12Q16514 161 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 SH3PXD2AQ5TCZ1 1133 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 DAB2IPQ5VWQ8 1189 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 TXNDC8Q6A555 127 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 THEM5Q8N1Q8 247 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 RPLP0P6Q8NHW5 317 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 BICD1Q96G01 975 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 CCSER1Q9C0I3 900 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 ECT2Q9H8V3 914 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 LARSQ9P2J5 1176 aaKnown RBP10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 LIMCH1Q9UPQ0 1083 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 DERAQ9Y315 318 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 LAMA5O15230 3695 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 ATG2BQ96BY7 2078 aa10.78□□□□□ -0.68
CALCOCO2-227ENST00000575560 TMEM8BA6NDV4 472 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 HNRNPDLO14979 420 aaKnown RBP10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 TOP3BO95985 862 aaKnown RBP10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 PLA2G4BP0C869 781 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 SPINK2P20155 84 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 CSRP1P21291 193 aaKnown RBP10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 ZNF252P-AS1Q0IIN9 211 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 FOXC1Q12948 553 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 GNL2Q13823 731 aaKnown RBP10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 TMEM132DQ14C87 1099 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 WSCD1Q658N2 575 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 PMS2CLQ68D20 193 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 CC2D1AQ6P1N0 951 aaPredicted RBP10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 SLC39A4Q6P5W5 647 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 METTL23Q86XA0 190 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 CCDC83Q8IWF9 413 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 GATA6Q92908 595 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 CD101Q93033 1021 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 EXOC4Q96A65 974 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 ADAM33Q9BZ11 813 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 ASB7Q9H672 318 aa10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 ABI2Q9NYB9 513 aaPredicted RBP10.77□□□□□ -0.69
CALCOCO2-227ENST00000575560 PKD1L2Q7Z442 2459 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 KHNYNO15037 678 aaKnown RBP10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 TADA3O75528 432 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 CSH1P0DML2 217 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 CSH2P0DML3 217 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 HMGN5P82970 282 aaKnown RBP10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 MTF1Q14872 753 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 ZRSR1Q15695 479 aaKnown RBP10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 USP39Q53GS9 565 aaKnown RBP10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 C11orf74Q86VG3 221 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 RASSF3Q86WH2 238 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 DCP1BQ8IZD4 617 aaKnown RBP10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 CPA6Q8N4T0 437 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 OSCP1Q8WVF1 389 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 MRPS31Q92665 395 aaKnown RBP10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 ACDQ96AP0 544 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 FAM212AQ96EL1 285 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 MYRFLQ96LU7 910 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 CYP2S1Q96SQ9 504 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 PLIN2Q99541 437 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 PYM1Q9BRP8 204 aaKnown RBP10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 MSTO1Q9BUK6 570 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 TMEM9BQ9NQ34 198 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 TMLHEQ9NVH6 421 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 DUS2Q9NX74 493 aaKnown RBP10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 ODF2LQ9ULJ1 636 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 INVSQ9Y283 1065 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 C2CD2Q9Y426 696 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 PCDHB5Q9Y5E4 795 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 ITPR1Q14643 2758 aa10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 FASNP49327 2511 aaKnown RBP10.76□□□□□ -0.69
CALCOCO2-227ENST00000575560 ABCA7Q8IZY2 2146 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 SRRM3A6NNA2 597 aaPredicted RBP10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 KPNA7A9QM74 516 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 PATE3B3GLJ2 98 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 K7EQS6 105 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 NOL4O94818 638 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 GBP1P32455 592 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 GPR15P49685 360 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 ACOT2P49753 483 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 TAF6P49848 677 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 DGKEP52429 567 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 ZNF131P52739 623 aa10.75□□□□□ -0.69
CALCOCO2-227ENST00000575560 IRX4P78413 519 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms