RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 TMEM126BQ8IUX1 230 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 ADAMTS16Q8TE57 1224 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 DDX17Q92841 729 aaKnown RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 PMM1Q92871 262 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 TAMM41Q96BW9 452 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 NSL1Q96IY1 281 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 SCYL1Q96KG9 808 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 C1orf74Q96LT6 269 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 VPS35Q96QK1 796 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 PSMB7Q99436 277 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 USB1Q9BQ65 265 aaKnown RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 C17orf80Q9BSJ5 609 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 EDEM3Q9BZQ6 932 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 GRIP2Q9C0E4 1043 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 RNF38Q9H0F5 515 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 EPB41L4BQ9H329 900 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 SMARCAD1Q9H4L7 1026 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 OLFML3Q9NRN5 406 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 MAP3K20Q9NYL2 800 aaKnown RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 ANKMY1Q9P2S6 941 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 WASF2Q9Y6W5 498 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 A0A0D9SFI3 127 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 NPHP3-ACAD11A0A0J9YXS1 232 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 TLDC2A0PJX2 215 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 BTBD11A6QL63 1104 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 CASQ2O14958 399 aaPredicted RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 ZNF263O14978 683 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 NCK2O43639 380 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 DNAJC6O75061 913 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 TAC1P20366 129 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 HSPA1LP34931 641 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 MLLT6P55198 1093 aaPredicted RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 CYP27A1Q02318 531 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 DHX34Q14147 1143 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 RPS6KA1Q15418 735 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 NPTX1Q15818 432 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 DNAL1Q4LDG9 190 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 CCDC58Q4VC31 144 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 C4orf46Q504U0 113 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 TAF1BQ53T94 588 aaPredicted RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 EGFLAMQ63HQ2 1017 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 KYAT3Q6YP21 454 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 TRMT10CQ7L0Y3 403 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 HAUS6Q7Z4H7 955 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 BRSK2Q8IWQ3 736 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 SCYL3Q8IZE3 742 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 VGLL2Q8N8G2 317 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 GALNT11Q8NCW6 608 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 PPP4R1Q8TF05 950 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 C10orf82Q8WW14 230 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 WASF1Q92558 559 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 PTCD3Q96EY7 689 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 FAR2Q96K12 515 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 ERGIC2Q96RQ1 377 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 FSD1Q9BTV5 496 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 NUP85Q9BW27 656 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 CALN1Q9BXU9 219 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 PAIP1Q9H074 479 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 KLHL25Q9H0H3 589 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 CCDC113Q9H0I3 377 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 DNAJC18Q9H819 358 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 NEK6Q9HC98 313 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 GPRC5DQ9NZD1 345 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 UBA2Q9UBT2 640 aaPredicted RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 SLC12A7Q9Y666 1083 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 KRBA1A5PL33 1030 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 ARHGEF35A5YM69 484 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 OR5K4A6NMS3 321 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 C2orf81A6NN90 581 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 EVPLLA8MZ36 301 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 BET1O15155 118 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 POLR1CO15160 346 aaPredicted RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 ACOX3O15254 700 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 FOXO3O43524 673 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 NMT2O60551 498 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 CBX6O95503 412 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 FAM228BP0C875 321 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 EEF2P13639 858 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 TTKP33981 857 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 S100A12P80511 92 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 ECT2LQ008S8 904 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 PRKCEQ02156 737 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 SF3A3Q12874 501 aaKnown RBP eCLIP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 DPYDQ12882 1025 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 TRADDQ15628 312 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 NAB2Q15742 525 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 SLC15A2Q16348 729 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 GPR162Q16538 588 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 METTL2BQ6P1Q9 378 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 VSTM1Q6UX27 236 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 FAM160A2Q8N612 972 aaPredicted RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 GRPEL2Q8TAA5 225 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 U2AF1L4Q8WU68 220 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 RPGRQ92834 1020 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 SPSB2Q99619 263 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 IER2Q9BTL4 223 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 MROQ9BYG7 248 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 CLPBQ9H078 707 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 SIAEQ9HAT2 523 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 EPB41L4AQ9HCS5 686 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms