RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 HMGA1P17096 107 aaKnown RBP11.24□□□□□ -0.61
TVP23B-208ENST00000575261 PDCP20941 246 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 MYL7Q01449 175 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 SRSF5Q13243 272 aaKnown RBP11.24□□□□□ -0.61
TVP23B-208ENST00000575261 ALCAMQ13740 583 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 RUNX3Q13761 415 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 CSRP2Q16527 193 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 RRAGBQ5VZM2 374 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 CC2D1AQ6P1N0 951 aaPredicted RBP11.24□□□□□ -0.61
TVP23B-208ENST00000575261 USP49Q70CQ1 688 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 CEP68Q76N32 757 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 TMEM150AQ86TG1 271 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 WDR5BQ86VZ2 330 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 TMEM86AQ8N2M4 240 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 PDCL2Q8N4E4 241 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 LRRC52Q8N7C0 313 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 ACCSQ96QU6 501 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 FAM83CQ9BQN1 747 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 FAM213AQ9BRX8 229 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 STRA6Q9BX79 667 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 ABCB6Q9NP58 842 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 HPS4Q9NQG7 708 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 OLFML3Q9NRN5 406 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 GKN1Q9NS71 199 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 C2orf42Q9NWW7 574 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 DDX43Q9NXZ2 648 aaKnown RBP11.24□□□□□ -0.61
TVP23B-208ENST00000575261 RBAKQ9NYW8 714 aaPredicted RBP11.24□□□□□ -0.61
TVP23B-208ENST00000575261 UXTQ9UBK9 157 aaPredicted RBP11.24□□□□□ -0.61
TVP23B-208ENST00000575261 FBXO2Q9UK22 296 aaPredicted RBP11.24□□□□□ -0.61
TVP23B-208ENST00000575261 CCL26Q9Y258 94 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 ZNF638Q14966 1978 aaKnown RBP11.24□□□□□ -0.61
TVP23B-208ENST00000575261 CACNA1BQ00975 2339 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 KMT2BQ9UMN6 2715 aaPredicted RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 RALGAPA1Q6GYQ0 2036 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 MYMKA6NI61 221 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 SLC30A4O14863 429 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 HUS1O60921 280 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 ATG13O75143 517 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 PRPF40AO75400 957 aaKnown RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 F11P03951 625 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 GARTP22102 1010 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 RPL10AP62906 217 aaKnown RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 AMPD2Q01433 879 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 KCNA1Q09470 495 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 GRSF1Q12849 480 aaKnown RBP eCLIP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 ZNF268Q14587 947 aaPredicted RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 TMEM196Q5HYL7 178 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 INTS6LQ5JSJ4 861 aaKnown RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 TRIM68Q6AZZ1 485 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 CCDC73Q6ZRK6 1079 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 SV2BQ7L1I2 683 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 SYCP3Q8IZU3 236 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 C1orf127Q8N9H9 656 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 SPATA18Q8TC71 538 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 CACTINQ8WUQ7 758 aaKnown RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 USP13Q92995 863 aaPredicted RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 EXOC4Q96A65 974 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 DNAJC19Q96DA6 116 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 SAAL1Q96ER3 474 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 ACBD6Q9BR61 282 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 PI4K2AQ9BTU6 479 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 EBF3Q9H4W6 596 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 TDP1Q9NUW8 608 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 TMLHEQ9NVH6 421 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 TBC1D7Q9P0N9 293 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 ITGA11Q9UKX5 1188 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 L1RE1Q9UN81 338 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 MAGED2Q9UNF1 606 aaPredicted RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 AGAP1Q9UPQ3 857 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 PCDHB13Q9Y5F0 798 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 SRPRBQ9Y5M8 271 aaKnown RBP11.23□□□□□ -0.61
TVP23B-208ENST00000575261 CLIC4Q9Y696 253 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 GREB1Q4ZG55 1949 aa11.23□□□□□ -0.61
TVP23B-208ENST00000575261 CCDC163A0A0D9SF12 145 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 FRMD3A2A2Y4 597 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 TRDMT1O14717 391 aaKnown RBP11.22□□□□□ -0.61
TVP23B-208ENST00000575261 EXTL3O43909 919 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 TADA3O75528 432 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 NOL4O94818 638 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 KRT19P08727 400 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 TMEM191BP0C7N4 346 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 IDEP14735 1019 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 ACAT1P24752 427 aaKnown RBP11.22□□□□□ -0.61
TVP23B-208ENST00000575261 STAT6P42226 847 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 GPR15P49685 360 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 CASP5P51878 434 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 WNT7BP56706 349 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 FAM160A1Q05DH4 1040 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 MTF1Q14872 753 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 PDGFRLQ15198 375 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 CFAP221Q4G0U5 840 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 TXNDC8Q6A555 127 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 FSTL4Q6MZW2 842 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 PKN3Q6P5Z2 889 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 SPAG17Q6Q759 2223 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 ZFHX4Q86UP3 3567 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 MON1AQ86VX9 555 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms