RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 NUP210Q8TEM1 1887 aaPredicted RBP16.37■□□□□ 0.21
CTNS-209ENST00000574776 MED19A0JLT2 244 aaPredicted RBP16.37■□□□□ 0.21
CTNS-209ENST00000574776 FRMD3A2A2Y4 597 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 CHURC1-FNTBB4DL54 471 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 EXTL3O43909 919 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 HUS1O60921 280 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 KRT19P08727 400 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 ACAT1P24752 427 aaKnown RBP16.37■□□□□ 0.21
CTNS-209ENST00000574776 FNTBP49356 437 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 NLRP12P59046 1061 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 PLCB2Q00722 1185 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 DMWDQ09019 674 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 BFSP1Q12934 665 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 NFE2Q16621 373 aaPredicted RBP16.37■□□□□ 0.21
CTNS-209ENST00000574776 DDR2Q16832 855 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 DGKKQ5KSL6 1271 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 TXNDC8Q6A555 127 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 CXorf38Q8TB03 319 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 ACBD6Q9BR61 282 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 C2orf42Q9NWW7 574 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 DDX43Q9NXZ2 648 aaKnown RBP16.37■□□□□ 0.21
CTNS-209ENST00000574776 RAB23Q9ULC3 237 aa16.37■□□□□ 0.21
CTNS-209ENST00000574776 MAGED2Q9UNF1 606 aaPredicted RBP16.37■□□□□ 0.21
CTNS-209ENST00000574776 KIF26AQ9ULI4 1882 aaPredicted RBP16.36■□□□□ 0.21
CTNS-209ENST00000574776 HRO43593 1189 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 TGM1P22735 817 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 CYP2F1P24903 491 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 AVPR1AP37288 418 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 RBP5P82980 135 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 ALCAMQ13740 583 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 ITPRIPL2Q3MIP1 535 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 HEATR6Q6AI08 1181 aaKnown RBP16.36■□□□□ 0.21
CTNS-209ENST00000574776 PRR23BQ6ZRT6 265 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 USP13Q92995 863 aaPredicted RBP16.36■□□□□ 0.21
CTNS-209ENST00000574776 INTS4Q96HW7 963 aaKnown RBP16.36■□□□□ 0.21
CTNS-209ENST00000574776 TMEM206Q9H813 350 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 PARD6AQ9NPB6 346 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 GMEB2Q9UKD1 530 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 GTF3C4Q9UKN8 822 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 ITGA11Q9UKX5 1188 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 USP18Q9UMW8 372 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 CCL26Q9Y258 94 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 SNX9Q9Y5X1 595 aa16.36■□□□□ 0.21
CTNS-209ENST00000574776 ZNF638Q14966 1978 aaKnown RBP16.35■□□□□ 0.21
CTNS-209ENST00000574776 K7ESF4 209 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 CSH1P0DML2 217 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 CSH2P0DML3 217 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 HOXC13P31276 330 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 MYL7Q01449 175 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 SPEM2Q0P670 501 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 SRSF5Q13243 272 aaKnown RBP16.35■□□□□ 0.21
CTNS-209ENST00000574776 CCINQ13939 588 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 SIM2Q14190 667 aaPredicted RBP16.35■□□□□ 0.21
CTNS-209ENST00000574776 LMBRD2Q68DH5 695 aaPredicted RBP16.35■□□□□ 0.21
CTNS-209ENST00000574776 OSTM1Q86WC4 334 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 CCDC65Q8IXS2 484 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 TMEM86AQ8N2M4 240 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 GPD1LQ8N335 351 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 LRRC52Q8N7C0 313 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 GLIS3Q8NEA6 775 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 HPS3Q969F9 1004 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 FAM83CQ9BQN1 747 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 MTMR12Q9C0I1 747 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
CTNS-209ENST00000574776 TDP1Q9NUW8 608 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 GDAP2Q9NXN4 497 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 SIX4Q9UIU6 781 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 ZMYM5Q9UJ78 669 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 MORC2Q9Y6X9 1032 aaPredicted RBP16.35■□□□□ 0.21
CTNS-209ENST00000574776 DENND4CQ5VZ89 1909 aa16.35■□□□□ 0.21
CTNS-209ENST00000574776 OTOL1A6NHN0 477 aaPredicted RBP16.34■□□□□ 0.21
CTNS-209ENST00000574776 HCRTO43612 131 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 STX6O43752 255 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 TMEM191BP0C7N4 346 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 DDX6P26196 483 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTNS-209ENST00000574776 RPL10AP62906 217 aaKnown RBP16.34■□□□□ 0.21
CTNS-209ENST00000574776 RUNX3Q13761 415 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 STK38Q15208 465 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 CCDC142Q17RM4 750 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 INTS6LQ5JSJ4 861 aaKnown RBP16.34■□□□□ 0.21
CTNS-209ENST00000574776 TRIM68Q6AZZ1 485 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 LAIR1Q6GTX8 287 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 MON1AQ86VX9 555 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 SYNPOQ8N3V7 929 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 LEO1Q8WVC0 666 aaPredicted RBP16.34■□□□□ 0.21
CTNS-209ENST00000574776 MRPS31Q92665 395 aaKnown RBP16.34■□□□□ 0.21
CTNS-209ENST00000574776 PKMYT1Q99640 499 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 EBF3Q9H4W6 596 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 HPS4Q9NQG7 708 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 INTS13Q9NVM9 706 aa16.34■□□□□ 0.21
CTNS-209ENST00000574776 TFIP11Q9UBB9 837 aaKnown RBP16.34■□□□□ 0.21
CTNS-209ENST00000574776 ATG2BQ96BY7 2078 aa16.33■□□□□ 0.21
CTNS-209ENST00000574776 NCOR2Q9Y618 2525 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 ZNF233A6NK53 670 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 PRR5-ARHGAP8B1AHC4 643 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 PAPSS2O95340 614 aaPredicted RBP16.33■□□□□ 0.2
CTNS-209ENST00000574776 SDHBP21912 280 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 LHX1P48742 406 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 NASPP49321 788 aaPredicted RBP16.33■□□□□ 0.2
CTNS-209ENST00000574776 ATXN1P54253 815 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms