RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 MYO1EQ12965 1108 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 PTK6Q13882 451 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 MFSD10Q14728 455 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 SLMAPQ14BN4 828 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 SKIDA1Q1XH10 827 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 NOTUMQ6P988 496 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 LRRC31Q6UY01 552 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 WHRNQ9P202 907 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 RALGAPA2Q2PPJ7 1873 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 SMIM35A0A1B0GVV1 85 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 RPS6KA5O75582 802 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 ZNF865P0CJ78 1059 aaPredicted RBP14.83□□□□□ -0.04
VPS33B-208ENST00000574755 VDRP11473 427 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 HPDP32754 393 aaPredicted RBP14.83□□□□□ -0.04
VPS33B-208ENST00000574755 YARSP54577 528 aaKnown RBP14.83□□□□□ -0.04
VPS33B-208ENST00000574755 INCA1Q0VD86 236 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 CCL14Q16627 93 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 TXNRD3NBQ6F5E7 133 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 MFSD7Q6UXD7 560 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 CCDC25Q86WR0 208 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 JOSD2Q8TAC2 188 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 ACSF2Q96CM8 615 aaPredicted RBP14.83□□□□□ -0.04
VPS33B-208ENST00000574755 SNF8Q96H20 258 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 EIF2AQ9BY44 585 aaKnown RBP14.83□□□□□ -0.04
VPS33B-208ENST00000574755 TRIM6Q9C030 488 aaPredicted RBP14.83□□□□□ -0.04
VPS33B-208ENST00000574755 CXCL16Q9H2A7 254 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 EPB41L4BQ9H329 900 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 PLEKHA5Q9HAU0 1116 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 METTL5Q9NRN9 209 aaKnown RBP14.83□□□□□ -0.04
VPS33B-208ENST00000574755 WDR35Q9P2L0 1181 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 HES2Q9Y543 173 aa14.83□□□□□ -0.04
VPS33B-208ENST00000574755 MBLAC1A4D2B0 266 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-208ENST00000574755 TJP3O95049 919 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 STAU1O95793 577 aaKnown RBP14.82□□□□□ -0.04
VPS33B-208ENST00000574755 HMGCRP04035 888 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 ERBB2P04626 1255 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 NUDT17P0C025 328 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 ITIH2P19823 946 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 CYP2B6P20813 491 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 VPS41P49754 854 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 IRF5Q13568 498 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 CNGA2Q16280 664 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 ZNF365Q70YC5 407 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 XYLT1Q86Y38 959 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 DNAJB3Q8WWF6 145 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 SEMA4AQ9H3S1 761 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 DDX56Q9NY93 547 aaKnown RBP14.82□□□□□ -0.04
VPS33B-208ENST00000574755 SCN1AP35498 2009 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 LRRD1A4D1F6 860 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 A6NNZ2 444 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 SHBGP04278 402 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 DARSP14868 501 aaKnown RBP14.82□□□□□ -0.04
VPS33B-208ENST00000574755 ATF2P15336 505 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 ADCY8P40145 1251 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 GPD2P43304 727 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 CPT1AP50416 773 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 ADCY2Q08462 1091 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 PDCLQ13371 301 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 SLC29A2Q14542 456 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 TUBB8Q3ZCM7 444 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 SPOCD1Q6ZMY3 1216 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 GSTA5Q7RTV2 222 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 RASAL3Q86YV0 1011 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 TTC39CQ8N584 583 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 EMC1Q8N766 993 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 UBA3Q8TBC4 463 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 SNX27Q96L92 541 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 ZMAT2Q96NC0 199 aaKnown RBP14.82□□□□□ -0.04
VPS33B-208ENST00000574755 NT5C1AQ9BXI3 368 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 CALCOCO1Q9P1Z2 691 aa14.82□□□□□ -0.04
VPS33B-208ENST00000574755 TRIP12Q14669 1992 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 MANSC4A6NHS7 340 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 IVLP07476 585 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 RARGP13631 454 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 GSCP56915 257 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 COPS2P61201 443 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 ZNF268Q14587 947 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 TFDP3Q5H9I0 405 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 GLRA4Q5JXX5 417 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 HOOK3Q86VS8 718 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 FNIP1Q8TF40 1166 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 RAPGEF5Q92565 580 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 DERAQ9Y315 318 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 SNX9Q9Y5X1 595 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 GRIN2DO15399 1336 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 TP73O15350 636 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 EIF3HO15372 352 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 LRCH4O75427 683 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 MYL3P08590 195 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 PSEN2P49810 448 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 BEX3Q00994 111 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 HIC1Q14526 733 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 PCBP1Q15365 356 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 SMTNL2Q2TAL5 461 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 AGBL2Q5U5Z8 902 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 EMC10Q5UCC4 262 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 POLNQ7Z5Q5 900 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 ARFGAP2Q8N6H7 521 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 CCDC89Q8N998 374 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 IPO4Q8TEX9 1081 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms