RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.83■□□□□ 0.44
TMEM88-202ENST00000574668 NXF1Q9UBU9 619 aaKnown RBP17.83■□□□□ 0.44
TMEM88-202ENST00000574668 TIMM13Q9Y5L4 95 aaPredicted RBP17.83■□□□□ 0.44
TMEM88-202ENST00000574668 P4HA2O15460 535 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 STAU1O95793 577 aaKnown RBP17.82■□□□□ 0.44
TMEM88-202ENST00000574668 YWHAHQ04917 246 aaPredicted RBP17.82■□□□□ 0.44
TMEM88-202ENST00000574668 NCAPHQ15003 741 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 WDR72Q3MJ13 1102 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 VARS2Q5ST30 1063 aaKnown RBP17.82■□□□□ 0.44
TMEM88-202ENST00000574668 CDKAL1Q5VV42 579 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 ZNF280DQ6N043 979 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 PRSS55Q6UWB4 352 aaPredicted RBP17.82■□□□□ 0.44
TMEM88-202ENST00000574668 GET4Q7L5D6 327 aaPredicted RBP17.82■□□□□ 0.44
TMEM88-202ENST00000574668 DHX40Q8IX18 779 aaKnown RBP17.82■□□□□ 0.44
TMEM88-202ENST00000574668 RHOBTB2Q9BYZ6 727 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 PIDD1Q9HB75 910 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.82■□□□□ 0.44
TMEM88-202ENST00000574668 RAB20Q9NX57 234 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 GDAP2Q9NXN4 497 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 WNT16Q9UBV4 365 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 DPP7Q9UHL4 492 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 SCN1AP35498 2009 aa17.82■□□□□ 0.44
TMEM88-202ENST00000574668 GOLGA6L19H0YKK7 550 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 CTXN3Q4LDR2 81 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 WSCD1Q658N2 575 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 OVOS1Q6IE37 1185 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 ELMSAN1Q6PJG2 1045 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 CYP26C1Q6V0L0 522 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 THEM5Q8N1Q8 247 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 TMEM86AQ8N2M4 240 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 TOP6BLQ8N6T0 577 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 LNX1Q8TBB1 728 aaPredicted RBP17.81■□□□□ 0.44
TMEM88-202ENST00000574668 FAM200AQ8TCP9 573 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 GPR152Q8TDT2 470 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 PI4K2AQ9BTU6 479 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 XYLT2Q9H1B5 865 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 VRTNQ9H8Y1 702 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 TBC1D17Q9HA65 648 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 TAB2Q9NYJ8 693 aa17.81■□□□□ 0.44
TMEM88-202ENST00000574668 PMM2O15305 246 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 ASS1P00966 412 aaKnown RBP17.8■□□□□ 0.44
TMEM88-202ENST00000574668 CYP11A1P05108 521 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 SRFP11831 508 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 RFX1P22670 979 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 ZNF445P59923 1031 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 NOP14P78316 857 aaKnown RBP17.8■□□□□ 0.44
TMEM88-202ENST00000574668 IQCB1Q15051 598 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 VWA3BQ502W6 1294 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 LILRA6Q6PI73 481 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 DPH6Q7L8W6 267 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 HDAC7Q8WUI4 952 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 SEMA4DQ92854 862 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 ANP32EQ9BTT0 268 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 PRKD2Q9BZL6 878 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 NDST4Q9H3R1 872 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 PLEKHA4Q9H4M7 779 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 FNIP2Q9P278 1114 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 L1RE1Q9UN81 338 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 POLIQ9UNA4 740 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 COQ4Q9Y3A0 265 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 BACE2Q9Y5Z0 518 aa17.8■□□□□ 0.44
TMEM88-202ENST00000574668 PAPLNO95428 1278 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 DCNP07585 359 aaKnown RBP17.79■□□□□ 0.44
TMEM88-202ENST00000574668 LAMP2P13473 410 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 HTR4Q13639 388 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 KRT31Q15323 416 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 SPOPLQ6IQ16 392 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 SCARA5Q6ZMJ2 495 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 GBP6Q6ZN66 633 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 LUZP1Q86V48 1076 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 ADGRF2Q8IZF7 708 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 PDCL2Q8N4E4 241 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 EHBP1Q8NDI1 1231 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 SPATA18Q8TC71 538 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 ELMO3Q96BJ8 720 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 RPP25Q9BUL9 199 aaKnown RBP17.79■□□□□ 0.44
TMEM88-202ENST00000574668 OXCT2Q9BYC2 517 aaPredicted RBP17.79■□□□□ 0.44
TMEM88-202ENST00000574668 VPS16Q9H269 839 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 SNX25Q9H3E2 840 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 ZDHHC7Q9NXF8 308 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 MTRRQ9UBK8 725 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 NUMBLQ9Y6R0 609 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 R4GN57 208 aa17.79■□□□□ 0.44
TMEM88-202ENST00000574668 OR6C75A6NL08 312 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 OAZ2O95190 189 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 FAM163BP0C2L3 166 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 ZNF18P17022 549 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 LHX1P48742 406 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 COPB1P53618 953 aaKnown RBP17.78■□□□□ 0.44
TMEM88-202ENST00000574668 ARPP19P56211 112 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 NTHL1P78549 312 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 LRMPQ12912 555 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 MRPL58Q14197 206 aaKnown RBP17.78■□□□□ 0.44
TMEM88-202ENST00000574668 SOWAHAQ2M3V2 549 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 NIF3L1Q9GZT8 377 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 LIMA1Q9UHB6 759 aaKnown RBP17.78■□□□□ 0.44
TMEM88-202ENST00000574668 FBXL5Q9UKA1 691 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 CDY1Q9Y6F8 540 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 DCHS1Q96JQ0 3298 aa17.78■□□□□ 0.44
TMEM88-202ENST00000574668 PTPRZ1P23471 2315 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms