RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 CCDC127Q96BQ5 260 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 ATXN3LQ9H3M9 355 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 UXTQ9UBK9 157 aaPredicted RBP17.69■□□□□ 0.42
TVP23B-206ENST00000574226 PTPRJQ12913 1337 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 H0Y858 1186 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 ATF6P18850 670 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 DDX6P26196 483 aaKnown RBP eCLIP17.68■□□□□ 0.42
TVP23B-206ENST00000574226 NDUFA8P51970 172 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 TRPC3Q13507 836 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 LMBRD2Q68DH5 695 aaPredicted RBP17.68■□□□□ 0.42
TVP23B-206ENST00000574226 ZNF852Q6ZMS4 543 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 GAREM2Q75VX8 874 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 ALYREFQ86V81 257 aaKnown RBP17.68■□□□□ 0.42
TVP23B-206ENST00000574226 FSIP1Q8NA03 581 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 KIAA0895Q8NCT3 520 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 ST13P5Q8NFI4 369 aaPredicted RBP17.68■□□□□ 0.42
TVP23B-206ENST00000574226 NUP210Q8TEM1 1887 aaPredicted RBP17.68■□□□□ 0.42
TVP23B-206ENST00000574226 SYAP1Q96A49 352 aaPredicted RBP17.68■□□□□ 0.42
TVP23B-206ENST00000574226 MSANTD3Q96H12 275 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 ZSWIM3Q96MP5 696 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 PLA2G2FQ9BZM2 168 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 TASP1Q9H6P5 420 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 CDH9Q9ULB4 789 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 F5P12259 2224 aa17.68■□□□□ 0.42
TVP23B-206ENST00000574226 PROB1E7EW31 1015 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 DPYSL4O14531 572 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 ZNF263O14978 683 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 CALUO43852 315 aaPredicted RBP17.67■□□□□ 0.42
TVP23B-206ENST00000574226 TACC1O75410 805 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 SOAT2O75908 522 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 RHOBTB3O94955 611 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 GJA1P17302 382 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 WARSP23381 471 aaKnown RBP17.67■□□□□ 0.42
TVP23B-206ENST00000574226 MAGEA11P43364 429 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 CLDN10P78369 228 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 KCNB1Q14721 858 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 POTEHQ6S545 545 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 VITQ6UXI7 678 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 KRBA2Q6ZNG9 492 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 SPATA2LQ8IUW3 424 aaPredicted RBP17.67■□□□□ 0.42
TVP23B-206ENST00000574226 YAF2Q8IY57 180 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 MMS19Q96T76 1030 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 BCO2Q9BYV7 579 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 DMAC2Q9NW81 257 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 GTF3C4Q9UKN8 822 aa17.67■□□□□ 0.42
TVP23B-206ENST00000574226 GOLGA6L4A6NEF3 574 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 HEPACAM2A8MVW5 462 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 MAPK13O15264 365 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 CHADO15335 359 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 PHACTR2O75167 634 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 ZNF202O95125 648 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 GDI1P31150 447 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 NBL1P41271 181 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 TNNC1P63316 161 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 FCHO2Q0JRZ9 810 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 ANGPT1Q15389 498 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 GPR158Q5T848 1215 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 FAM171BQ6P995 826 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 VSTM1Q6UX27 236 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 TPRG1Q6ZUI0 275 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 ARID3BQ8IVW6 561 aaPredicted RBP17.66■□□□□ 0.42
TVP23B-206ENST00000574226 PARD3BQ8TEW8 1205 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 TRMT2BQ96GJ1 504 aaKnown RBP17.66■□□□□ 0.42
TVP23B-206ENST00000574226 PKMYT1Q99640 499 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 LPIN3Q9BQK8 851 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 SYT15Q9BQS2 421 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 SNX25Q9H3E2 840 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 KCTD10Q9H3F6 313 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 VRTNQ9H8Y1 702 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 ZNF334Q9HCZ1 680 aaPredicted RBP17.66■□□□□ 0.42
TVP23B-206ENST00000574226 LTB4R2Q9NPC1 389 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 TMLHEQ9NVH6 421 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 EHD2Q9NZN4 543 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 DLGAP2Q9P1A6 1054 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 TRAF3IP3Q9Y228 551 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 FRMD4BQ9Y2L6 1034 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 DENND4CQ5VZ89 1909 aa17.66■□□□□ 0.42
TVP23B-206ENST00000574226 ZFHX2Q9C0A1 2572 aaPredicted RBP17.65■□□□□ 0.42
TVP23B-206ENST00000574226 IKBKBO14920 756 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 NR3C1P04150 777 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 ACAT1P24752 427 aaKnown RBP17.65■□□□□ 0.42
TVP23B-206ENST00000574226 VIPR2P41587 438 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 ENPEPQ07075 957 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 DPYDQ12882 1025 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 GRM2Q14416 872 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 UBXN2BQ14CS0 331 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 NFIL3Q16649 462 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 WDR72Q3MJ13 1102 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 ARHGAP29Q52LW3 1261 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 TMC2Q8TDI7 906 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 CSGALNACT1Q8TDX6 532 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 GIPC2Q8TF65 315 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 KBTBD7Q8WVZ9 684 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 MRPS31Q92665 395 aaKnown RBP17.65■□□□□ 0.42
TVP23B-206ENST00000574226 MYRFLQ96LU7 910 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 PI4K2AQ9BTU6 479 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 GTPBP4Q9BZE4 634 aaKnown RBP17.65■□□□□ 0.42
TVP23B-206ENST00000574226 SEMA4AQ9H3S1 761 aa17.65■□□□□ 0.42
TVP23B-206ENST00000574226 IL21Q9HBE4 155 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms