RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 SHDQ96IW2 340 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 CGRRF1Q99675 332 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 MRPL45Q9BRJ2 306 aaKnown RBP12.16□□□□□ -0.46
RPAIN-214ENST00000574003 LTB4R2Q9NPC1 389 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 GDAP2Q9NXN4 497 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 NDRG2Q9UN36 371 aaKnown RBP12.16□□□□□ -0.46
RPAIN-214ENST00000574003 MAGED2Q9UNF1 606 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-214ENST00000574003 HPSEQ9Y251 543 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 PCDHB5Q9Y5E4 795 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 R4GN57 208 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 GPR179Q6PRD1 2367 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 COL4A2P08572 1712 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 UBE4BO95155 1302 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 GABRDO14764 452 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 KIAA0391O15091 583 aaKnown RBP12.15□□□□□ -0.46
RPAIN-214ENST00000574003 PDGFRBP09619 1106 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
RPAIN-214ENST00000574003 PSMC3P17980 439 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 KRT85P78386 507 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 MYL7Q01449 175 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 PRKCQQ04759 706 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 FZD5Q13467 585 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 VEPH1Q14D04 833 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 PSMD6Q15008 389 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 TAF12Q16514 161 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 KNOP1Q1ED39 458 aaKnown RBP12.15□□□□□ -0.46
RPAIN-214ENST00000574003 HS2ST1Q7LGA3 356 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 ITIH5Q86UX2 942 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 WDR49Q8IV35 697 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 SCN4BQ8IWT1 228 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 MAML2Q8IZL2 1156 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-214ENST00000574003 TOP6BLQ8N6T0 577 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 FSIP1Q8NA03 581 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 MMS19Q96T76 1030 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 ACBD6Q9BR61 282 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 SLC46A2Q9BY10 475 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 TRPV4Q9HBA0 871 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 CRTAC1Q9NQ79 661 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 EXOC1Q9NV70 894 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 ASB3Q9Y575 518 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 ZNF638Q14966 1978 aaKnown RBP12.15□□□□□ -0.46
RPAIN-214ENST00000574003 DENND4CQ5VZ89 1909 aa12.15□□□□□ -0.46
RPAIN-214ENST00000574003 KIF26AQ9ULI4 1882 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-214ENST00000574003 ARNTLO00327 626 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 ZNF263O14978 683 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 EXOC3O60645 756 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 TADA3O75528 432 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 F11P03951 625 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 NBL1P41271 181 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 SYKP43405 635 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 MYL6P60660 151 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 DLG4P78352 724 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 MYO1EQ12965 1108 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 SURF1Q15526 300 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 TXNDC8Q6A555 127 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 C1orf210Q8IVY1 113 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 MFSD6LQ8IWD5 586 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 TMEM86AQ8N2M4 240 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 MAB21L3Q8N8X9 362 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 RIN3Q8TB24 985 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 MYLPFQ96A32 169 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 FNBP1Q96RU3 617 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 SYT15Q9BQS2 421 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 IRF2BPLQ9H1B7 796 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 KIAA1586Q9HCI6 787 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 SPATA6Q9NWH7 488 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-214ENST00000574003 HSFX1Q9UBD0 423 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 CCL26Q9Y258 94 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 R3HCC1Q9Y3T6 440 aaKnown RBP12.14□□□□□ -0.47
RPAIN-214ENST00000574003 OBSL1O75147 1896 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 ATG2BQ96BY7 2078 aa12.14□□□□□ -0.47
RPAIN-214ENST00000574003 NUP210Q8TEM1 1887 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-214ENST00000574003 PRR23AA6NEV1 266 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 SLC38A8A6NNN8 435 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 LRRIQ3A6PVS8 624 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-214ENST00000574003 PROB1E7EW31 1015 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 SP9P0CG40 484 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 RAP1GAPP47736 663 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 NLRP12P59046 1061 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 TNK2Q07912 1038 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 NFE2Q16621 373 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-214ENST00000574003 ARHGAP15Q53QZ3 475 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 WDR44Q5JSH3 913 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 FAM171BQ6P995 826 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 TSSK4Q6SA08 328 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 LIMS2Q7Z4I7 341 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 SPATA2LQ8IUW3 424 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-214ENST00000574003 C12orf56Q8IXR9 622 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 YAF2Q8IY57 180 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 C2orf15Q8WU43 125 aaKnown RBP12.13□□□□□ -0.47
RPAIN-214ENST00000574003 DEPDC1BQ8WUY9 529 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 DNASE1L2Q92874 299 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 KCTD10Q9H3F6 313 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 DPEP3Q9H4B8 488 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 TASP1Q9H6P5 420 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.13□□□□□ -0.475e-6■■■■□ 23.1
RPAIN-214ENST00000574003 GTSE1Q9NYZ3 720 aa12.13□□□□□ -0.47
RPAIN-214ENST00000574003 MAPK8IP1Q9UQF2 711 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms