RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 GTF3C4Q9UKN8 822 aa19.48■□□□□ 0.71
CHD3-214ENST00000572579 ITGA11Q9UKX5 1188 aa19.48■□□□□ 0.71
CHD3-214ENST00000572579 MRPS17Q9Y2R5 130 aaKnown RBP19.48■□□□□ 0.71
CHD3-214ENST00000572579 NME7Q9Y5B8 376 aa19.48■□□□□ 0.71
CHD3-214ENST00000572579 SNX9Q9Y5X1 595 aa19.48■□□□□ 0.71
CHD3-214ENST00000572579 MYBPHLA2RUH7 354 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 SLC38A8A6NNN8 435 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 POLR2DO15514 142 aaKnown RBP19.47■□□□□ 0.71
CHD3-214ENST00000572579 ATP2C2O75185 946 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 F13A1P00488 732 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 KRT19P08727 400 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 MAGEA9P43362 315 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 NLRP12P59046 1061 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 DCP1BQ8IZD4 617 aaKnown RBP19.47■□□□□ 0.71
CHD3-214ENST00000572579 IQUBQ8NA54 791 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 KBTBD7Q8WVZ9 684 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 E2F7Q96AV8 911 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 CHFRQ96EP1 664 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 CUEDC2Q9H467 287 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 AGPAT3Q9NRZ7 376 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 RBM12Q9NTZ6 932 aaKnown RBP19.47■□□□□ 0.71
CHD3-214ENST00000572579 CCL26Q9Y258 94 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 PCDHB5Q9Y5E4 795 aa19.47■□□□□ 0.71
CHD3-214ENST00000572579 OTOL1A6NHN0 477 aaPredicted RBP19.46■□□□□ 0.71
CHD3-214ENST00000572579 LILRB5O75023 590 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 PRPF40AO75400 957 aaKnown RBP19.46■□□□□ 0.71
CHD3-214ENST00000572579 TADA3O75528 432 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 FGF19O95750 216 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 CST3P01034 146 aaPredicted RBP19.46■□□□□ 0.71
CHD3-214ENST00000572579 MLLT6P55198 1093 aaPredicted RBP19.46■□□□□ 0.71
CHD3-214ENST00000572579 ASIC1P78348 528 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 INTS6LQ5JSJ4 861 aaKnown RBP19.46■□□□□ 0.71
CHD3-214ENST00000572579 TXNDC8Q6A555 127 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 FAM171BQ6P995 826 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 MAMSTRQ6ZN01 415 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 GRAMD1CQ8IYS0 662 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 TOP6BLQ8N6T0 577 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 RDH13Q8NBN7 331 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 SPRYD3Q8NCJ5 442 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 LEO1Q8WVC0 666 aaPredicted RBP19.46■□□□□ 0.71
CHD3-214ENST00000572579 ZNF516Q92618 1163 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 OBP2AQ9NY56 170 aa19.46■□□□□ 0.71
CHD3-214ENST00000572579 ZNF233A6NK53 670 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 CLIC2O15247 247 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 EIF3DO15371 548 aaKnown RBP eCLIP19.45■□□□□ 0.7
CHD3-214ENST00000572579 NCAM2O15394 837 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 HUS1O60921 280 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 DNM1Q05193 864 aaKnown RBP19.45■□□□□ 0.7
CHD3-214ENST00000572579 CUL4BQ13620 913 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 VEPH1Q14D04 833 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 FAM26FQ5R3K3 315 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 RESP18Q5W5W9 173 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 TMEM86AQ8N2M4 240 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 USP13Q92995 863 aaPredicted RBP19.45■□□□□ 0.7
CHD3-214ENST00000572579 HPDLQ96IR7 371 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 CRTAC1Q9NQ79 661 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 ZSCAN32Q9NX65 697 aa19.45■□□□□ 0.7
CHD3-214ENST00000572579 SPECC1L-ADORA2AF8WAN1 911 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 CDC25CP30307 473 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 CTHP32929 405 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 TSPY1Q01534 308 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 SATB1Q01826 763 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 DMWDQ09019 674 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 DUOXA2Q1HG44 320 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 ARHGAP15Q53QZ3 475 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 ZC3H14Q6PJT7 736 aaKnown RBP19.44■□□□□ 0.7
CHD3-214ENST00000572579 UNC13DQ70J99 1090 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 TRAPPC11Q7Z392 1133 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 NELFCDQ8IXH7 590 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 YAF2Q8IY57 180 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 ADGRF2Q8IZF7 708 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 CMTM8Q8IZV2 173 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 MAB21L3Q8N8X9 362 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 PLEKHO2Q8TD55 490 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 BPIFB1Q8TDL5 484 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 SLC22A12Q96S37 553 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 FAM83CQ9BQN1 747 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 LRRC27Q9C0I9 530 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 HPS4Q9NQG7 708 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 RCOR1Q9UKL0 485 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 ZDHHC9Q9Y397 364 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 PCDHGA2Q9Y5H1 932 aa19.44■□□□□ 0.7
CHD3-214ENST00000572579 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.43■□□□□ 0.7
CHD3-214ENST00000572579 KIAA0391O15091 583 aaKnown RBP19.43■□□□□ 0.7
CHD3-214ENST00000572579 KLRC4O43908 158 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 NOL4O94818 638 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 TMEM191BP0C7N4 346 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 AFMP43652 599 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 AMPD3Q01432 767 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 NFE2Q16621 373 aaPredicted RBP19.43■□□□□ 0.7
CHD3-214ENST00000572579 ARHGAP29Q52LW3 1261 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 Q6ZS52 159 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 KIAA2013Q8IYS2 634 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 CSGALNACT1Q8TDX6 532 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 ABCB6Q9NP58 842 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 SLC39A2Q9NP94 309 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 GKN1Q9NS71 199 aa19.43■□□□□ 0.7
CHD3-214ENST00000572579 MAGED2Q9UNF1 606 aaPredicted RBP19.43■□□□□ 0.7
CHD3-214ENST00000572579 FANCMQ8IYD8 2048 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 DPYSL4O14531 572 aa19.42■□□□□ 0.7
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