RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 NLRP12P59046 1061 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 SATB1Q01826 763 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 STK38Q15208 465 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 TAF12Q16514 161 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 INTS6LQ5JSJ4 861 aaKnown RBP13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 CCDC65Q8IXS2 484 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 CMTM8Q8IZV2 173 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 TMEM86AQ8N2M4 240 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 GLIS3Q8NEA6 775 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 ACBD6Q9BR61 282 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 SLC46A2Q9BY10 475 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 PCIF1Q9H4Z3 704 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 PDE11AQ9HCR9 933 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 ABCB6Q9NP58 842 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 RBM12Q9NTZ6 932 aaKnown RBP13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 KBTBD4Q9NVX7 518 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 DDX43Q9NXZ2 648 aaKnown RBP13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 NCDNQ9UBB6 729 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 PTPRJQ12913 1337 aa13.84□□□□□ -0.19
ATP2A3-211ENST00000572176 GABRDO14764 452 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 SPTLC2O15270 562 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 HUS1O60921 280 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 TADA3O75528 432 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 TMEM191BP0C7N4 346 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 CSH1P0DML2 217 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 CSH2P0DML3 217 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 DDX6P26196 483 aaKnown RBP eCLIP13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 CXCL12P48061 93 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 NRLP54845 237 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 MYL7Q01449 175 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 TNK2Q07912 1038 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 BFSP1Q12934 665 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 CCINQ13939 588 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 Q6ZS52 159 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 OSTM1Q86WC4 334 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 SPEM1Q8N4L4 309 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 CSGALNACT2Q8N6G5 542 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 TOP6BLQ8N6T0 577 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 CELF5Q8N6W0 485 aaKnown RBP13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 STKLD1Q8NE28 680 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 PI4K2AQ9BTU6 479 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 TRIM9Q9C026 710 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 SMG9Q9H0W8 520 aaKnown RBP13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 CUEDC2Q9H467 287 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 INTS13Q9NVM9 706 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 SNX9Q9Y5X1 595 aa13.83□□□□□ -0.2
ATP2A3-211ENST00000572176 SOBPA7XYQ1 873 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 HCRTO43612 131 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 PRPF40AO75400 957 aaKnown RBP13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 NOL4O94818 638 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 KRT19P08727 400 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 ACAT1P24752 427 aaKnown RBP13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 RBP5P82980 135 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 PUM1Q14671 1186 aaKnown RBP eCLIP13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 PON2Q15165 354 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 CCDC142Q17RM4 750 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 CFAP221Q4G0U5 840 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 DGKKQ5KSL6 1271 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 LMBRD2Q68DH5 695 aaPredicted RBP13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 CNNM4Q6P4Q7 775 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 STXBP4Q6ZWJ1 553 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 LIMS2Q7Z4I7 341 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 CBWD2Q8IUF1 395 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 ADGRF2Q8IZF7 708 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 MAB21L3Q8N8X9 362 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 TTC8Q8TAM2 541 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 NOC3LQ8WTT2 800 aaKnown RBP13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 USP13Q92995 863 aaPredicted RBP13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 HPS3Q969F9 1004 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 TRMT2BQ96GJ1 504 aaKnown RBP13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 ANKRD36BP1Q96IX9 119 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 FAM83CQ9BQN1 747 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 LRRC27Q9C0I9 530 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 KIF9Q9HAQ2 790 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 DLL3Q9NYJ7 618 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 CCL26Q9Y258 94 aa13.82□□□□□ -0.2
ATP2A3-211ENST00000572176 K7ESF4 209 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 EIF3DO15371 548 aaKnown RBP eCLIP13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 YEATS4O95619 227 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 TGM1P22735 817 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 CYP2F1P24903 491 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 PCSK1P29120 753 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 HOXD13P35453 343 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 AVPR1AP37288 418 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 LHX1P48742 406 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 RPL10AP62906 217 aaKnown RBP13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 ZNF268Q14587 947 aaPredicted RBP13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 SURF1Q15526 300 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 SOWAHAQ2M3V2 549 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 ITPRIPL2Q3MIP1 535 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 SDHAF4Q5VUM1 108 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 TXNDC8Q6A555 127 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 SHC4Q6S5L8 630 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 EPM2AIP1Q7L775 607 aaPredicted RBP13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 WDR49Q8IV35 697 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 SYNPOQ8N3V7 929 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 GPR161Q8N6U8 529 aaKnown RBP13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 OR5B17Q8NGF7 314 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 RIN3Q8TB24 985 aa13.81□□□□□ -0.2
ATP2A3-211ENST00000572176 MRPS31Q92665 395 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms