RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 FAM122AQ96E09 287 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 TCEAL4Q96EI5 215 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 PCED1BQ96HM7 432 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 MYADMQ96S97 322 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 SYT15Q9BQS2 421 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 ACBD6Q9BR61 282 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 LRRC3Q9BY71 257 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 ELOVL4Q9GZR5 314 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 METTL14Q9HCE5 456 aaKnown RBP7.47□□□□□ -1.21
SMG6-209ENST00000571442 ZNF334Q9HCZ1 680 aaPredicted RBP7.47□□□□□ -1.21
SMG6-209ENST00000571442 WDR6Q9NNW5 1121 aaKnown RBP7.47□□□□□ -1.21
SMG6-209ENST00000571442 ZDHHC7Q9NXF8 308 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 ABI2Q9NYB9 513 aaPredicted RBP7.47□□□□□ -1.21
SMG6-209ENST00000571442 AJAP1Q9UKB5 411 aaPredicted RBP7.47□□□□□ -1.21
SMG6-209ENST00000571442 HCN4Q9Y3Q4 1203 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 PIEZO1Q92508 2521 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 ZNF638Q14966 1978 aaKnown RBP7.46□□□□□ -1.21
SMG6-209ENST00000571442 SYCE3A1L190 88 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 SPDYE4A6NLX3 237 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 A8MXQ7 604 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 LOC730098B7Z3J9 87 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 PRRG1O14668 218 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 RHOP08100 348 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 HAPLN1P10915 354 aaPredicted RBP7.46□□□□□ -1.22
SMG6-209ENST00000571442 PTPN1P18031 435 aaKnown RBP7.46□□□□□ -1.22
SMG6-209ENST00000571442 CD58P19256 250 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 HOXA9P31269 272 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 ELF1P32519 619 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 PLA2G5P39877 138 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 LHX1P48742 406 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 NDST1P52848 882 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 KCNMA1Q12791 1236 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 NFKBIBQ15653 356 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 STX1AQ16623 288 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 DDR2Q16832 855 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 UVSSAQ2YD98 709 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 MGAT5BQ3V5L5 792 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 ANO6Q4KMQ2 910 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 MDH1BQ5I0G3 518 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 TMEM31Q5JXX7 168 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 PRSS36Q5K4E3 855 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 ATAT1Q5SQI0 421 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 LIN9Q5TKA1 542 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 CDKAL1Q5VV42 579 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 SASS6Q6UVJ0 657 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 APTXQ7Z2E3 356 aaKnown RBP7.46□□□□□ -1.22
SMG6-209ENST00000571442 ACOT1Q86TX2 421 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 TMC8Q8IU68 726 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 CREBRFQ8IUR6 639 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 ADHFE1Q8IWW8 467 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 DHX40Q8IX18 779 aaKnown RBP7.46□□□□□ -1.22
SMG6-209ENST00000571442 THEM5Q8N1Q8 247 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 C12orf29Q8N999 325 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 SPATA18Q8TC71 538 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 GIPC2Q8TF65 315 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 TAF4BQ92750 862 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 RPGRIP1Q96KN7 1286 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 KREMEN1Q96MU8 473 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 SEPT5Q99719 369 aaPredicted RBP7.46□□□□□ -1.22
SMG6-209ENST00000571442 CRACR2AQ9BSW2 395 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 PHF7Q9BWX1 381 aaPredicted RBP7.46□□□□□ -1.22
SMG6-209ENST00000571442 B3GNT5Q9BYG0 378 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 ZNF518BQ9C0D4 1074 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 NIF3L1Q9GZT8 377 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 SMOC2Q9H3U7 446 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 THAP9Q9H5L6 903 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 SIX2Q9NPC8 291 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 FANCLQ9NW38 375 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 CDH9Q9ULB4 789 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 R3HCC1Q9Y3T6 440 aaKnown RBP7.46□□□□□ -1.22
SMG6-209ENST00000571442 NFE2L3Q9Y4A8 694 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMG6-209ENST00000571442 ANAPC1Q9H1A4 1944 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 NCANO14594 1321 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 CLUHO75153 1309 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 MYH10P35580 1976 aa7.46□□□□□ -1.22
SMG6-209ENST00000571442 PATJQ8NI35 1801 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 FAM86C2PA6NEL3 165 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 KCNJ18B7U540 433 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 RNF225M0QZC1 329 aaPredicted RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 PMM2O15305 246 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 CILPO75339 1184 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 TADA3O75528 432 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 BEST1O76090 585 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 CLSTN1O94985 981 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 GNA14O95837 355 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 LRG1P02750 347 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 AFPP02771 609 aaKnown RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 POU2F2P09086 479 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 HNRNPA1P09651 372 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMG6-209ENST00000571442 FAM163BP0C2L3 166 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 CCDC192P0DO97 292 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 ATP1A3P13637 1013 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 CCDC130P13994 396 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 HMGA1P17096 107 aaKnown RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 CEBPBP17676 345 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 SLC9A1P19634 815 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 ACO1P21399 889 aaKnown RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 BDNFP23560 247 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 PCSK1P29120 753 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms