RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 KHDC1Q4VXA5 237 aaKnown RBP18.36■□□□□ 0.53
SCARF1-205ENST00000571272 CDCA2Q69YH5 1023 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-205ENST00000571272 APBB1IPQ7Z5R6 666 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-205ENST00000571272 LRRC6Q86X45 466 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 TARS2Q9BW92 718 aaKnown RBP18.36■□□□□ 0.53
SCARF1-205ENST00000571272 ZWILCHQ9H900 591 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 PDLIM7Q9NR12 457 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 LRRIQ4A6NIV6 560 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 ENO4A6NNW6 628 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 MARK3P27448 753 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 MCL1Q07820 350 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 CTC1Q2NKJ3 1217 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 DSTYKQ6XUX3 929 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 FBXO36Q8NEA4 188 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 ACTL9Q8TC94 416 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 ASAP3Q8TDY4 903 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 WNK4Q96J92 1243 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 HEY2Q9UBP5 337 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 AGTPBP1Q9UPW5 1226 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 RIPK3Q9Y572 518 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 TCRBV7S3A2A0A539 114 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 ZBED4O75132 1171 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 ITGAVP06756 1048 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 NR3C2P08235 984 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 LINGO3P0C6S8 592 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 NCOA4Q13772 614 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 BBS9Q3SYG4 887 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 WASHC2DQ5SRD0 308 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 CPT1BQ92523 772 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 PRR11Q96HE9 360 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 WDR83Q9BRX9 315 aaKnown RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 CADM1Q9BY67 442 aaKnown RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 ARL8BQ9NVJ2 186 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 TRAFD1O14545 582 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 WDR46O15213 610 aaKnown RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 CST3P01034 146 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 NRLP54845 237 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 GHRHRQ02643 423 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 SYCP2LQ5T4T6 812 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 ZNF276Q8N554 614 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 ENDOVQ8N8Q3 282 aaKnown RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 ARMC2Q8NEN0 867 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 NKD2Q969F2 451 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 MSTO1Q9BUK6 570 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 MANSC1Q9H8J5 431 aa18.35■□□□□ 0.53
SCARF1-205ENST00000571272 FBXO6Q9NRD1 293 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 FARP1Q9Y4F1 1045 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-205ENST00000571272 DPPA5A6NC42 116 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 C2orf71A6NGG8 1288 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 A6NHS1 94 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 PHBP35232 272 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 STYK1Q6J9G0 422 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 PALM2Q8IXS6 379 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 ATP11CQ8NB49 1132 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 FBXO40Q9UH90 709 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 LIN7AO14910 233 aaPredicted RBP18.34■□□□□ 0.53
SCARF1-205ENST00000571272 TBC1D12O60347 775 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 NEFHP12036 1026 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 TBXAS1P24557 533 aaPredicted RBP18.34■□□□□ 0.53
SCARF1-205ENST00000571272 ARL4CP56559 192 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 GRIK3Q13003 919 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 C4orf50Q6ZRC1 276 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 VSIG10LQ86VR7 867 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 SLC35B2Q8TB61 432 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 GINM1Q9NU53 330 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 ZNRF3Q9ULT6 936 aa18.34■□□□□ 0.53
SCARF1-205ENST00000571272 E7ENQ6 273 aa18.33■□□□□ 0.53
SCARF1-205ENST00000571272 K7ERI5 159 aa18.33■□□□□ 0.53
SCARF1-205ENST00000571272 CST8O60676 142 aa18.33■□□□□ 0.53
SCARF1-205ENST00000571272 PSAPP07602 524 aa18.33■□□□□ 0.53
SCARF1-205ENST00000571272 ATP6V1C1P21283 382 aa18.33■□□□□ 0.53
SCARF1-205ENST00000571272 ADGRD1Q6QNK2 874 aa18.33■□□□□ 0.53
SCARF1-205ENST00000571272 PPIL6Q8IXY8 311 aa18.33■□□□□ 0.53
SCARF1-205ENST00000571272 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.33■□□□□ 0.53
SCARF1-205ENST00000571272 DNAJC9Q8WXX5 260 aa18.33■□□□□ 0.53
SCARF1-205ENST00000571272 ANKRD27Q96NW4 1050 aa18.33■□□□□ 0.53
SCARF1-205ENST00000571272 CALB1P05937 261 aa18.33■□□□□ 0.52
SCARF1-205ENST00000571272 KCNA2P16389 499 aa18.33■□□□□ 0.52
SCARF1-205ENST00000571272 ZBTB16Q05516 673 aa18.33■□□□□ 0.52
SCARF1-205ENST00000571272 MUM1Q2TAK8 710 aa18.33■□□□□ 0.52
SCARF1-205ENST00000571272 LRRC38Q5VT99 294 aa18.33■□□□□ 0.52
SCARF1-205ENST00000571272 GPAT2Q6NUI2 795 aa18.33■□□□□ 0.52
SCARF1-205ENST00000571272 TRIM55Q9BYV6 548 aa18.33■□□□□ 0.52
SCARF1-205ENST00000571272 SAR1AQ9NR31 198 aa18.33■□□□□ 0.52
SCARF1-205ENST00000571272 SNCAIPQ9Y6H5 919 aa18.33■□□□□ 0.52
SCARF1-205ENST00000571272 RGS20O76081 388 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 HAUS5O94927 633 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 EDN1P05305 212 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 SERPINB3P29508 390 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 RPL22P35268 128 aaKnown RBP18.32■□□□□ 0.52
SCARF1-205ENST00000571272 TUBP50607 506 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 ENPEPQ07075 957 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 EMC2Q15006 297 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 CCDC6Q16204 474 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 LMNTD2Q8IXW0 634 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 BANPQ8N9N5 519 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 RDM1Q8NG50 284 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 RSAD2Q8WXG1 361 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 TSSK1BQ9BXA7 367 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms