RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 MYO1EQ12965 1108 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 VEPH1Q14D04 833 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 DDR2Q16832 855 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 C1orf220Q5T0J3 134 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 GPR158Q5T848 1215 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 TDRD10Q5VZ19 366 aaKnown RBP5.8□□□□□ -1.48
CHD3-212ENST00000570758 FAM171BQ6P995 826 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 DPH6Q7L8W6 267 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 TMEM150AQ86TG1 271 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 SLC9A9Q8IVB4 645 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 CCDC105Q8IYK2 499 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 FMR1NBQ8N0W7 255 aaPredicted RBP5.8□□□□□ -1.48
CHD3-212ENST00000570758 PJA1Q8NG27 643 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 GOLGA5Q8TBA6 731 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 SPATA18Q8TC71 538 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 C2orf15Q8WU43 125 aaKnown RBP5.8□□□□□ -1.48
CHD3-212ENST00000570758 LRRC3BQ96PB8 259 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 FNBP1Q96RU3 617 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 MRPL45Q9BRJ2 306 aaKnown RBP5.8□□□□□ -1.48
CHD3-212ENST00000570758 DDX23Q9BUQ8 820 aaKnown RBP5.8□□□□□ -1.48
CHD3-212ENST00000570758 SMG9Q9H0W8 520 aaKnown RBP5.8□□□□□ -1.48
CHD3-212ENST00000570758 XYLT2Q9H1B5 865 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 ATXN3LQ9H3M9 355 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 SLITRK6Q9H5Y7 841 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 ZFP14Q9HCL3 533 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 CRTAC1Q9NQ79 661 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 DLGAP2Q9P1A6 1054 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 CGNQ9P2M7 1197 aaKnown RBP5.8□□□□□ -1.48
CHD3-212ENST00000570758 GTF3C4Q9UKN8 822 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 MAPK8IP1Q9UQF2 711 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 MTF2Q9Y483 593 aaPredicted RBP5.8□□□□□ -1.48
CHD3-212ENST00000570758 PCDHB5Q9Y5E4 795 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 ATP6V1DQ9Y5K8 247 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 MUC6Q6W4X9 2439 aa5.8□□□□□ -1.48
CHD3-212ENST00000570758 KANSL1LA0AUZ9 987 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 FAM170BA6NMN3 283 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 SLC38A8A6NNN8 435 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 ARNTLO00327 626 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 PDXKO00764 312 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 CALUO43852 315 aaPredicted RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 PHACTR2O75167 634 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 TADA3O75528 432 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 NOL4O94818 638 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 PRAMEF12O95522 483 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 STAU1O95793 577 aaKnown RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 F11P03951 625 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 TARSP26639 723 aaKnown RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 PCSK1P29120 753 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 CDC25CP30307 473 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 GDI1P31150 447 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 RAP1GAPP47736 663 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 LHX1P48742 406 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 MRE11P49959 708 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 NLRP12P59046 1061 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 CLDN10P78369 228 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 NUCB2P80303 420 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 PFKPQ01813 784 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 PRKCQQ04759 706 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 PNOCQ13519 176 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 NCOA4Q13772 614 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 KCNB1Q14721 858 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 UBXN2BQ14CS0 331 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 NFE2Q16621 373 aaPredicted RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 ZCWPW2Q504Y3 356 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 CEP135Q66GS9 1140 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 TPRG1Q6ZUI0 275 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 ITIH5Q86UX2 942 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 ARID3BQ8IVW6 561 aaPredicted RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 MFSD6LQ8IWD5 586 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 SCN4BQ8IWT1 228 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 SMYD4Q8IYR2 804 aaPredicted RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 ENGASEQ8NFI3 743 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 RIN3Q8TB24 985 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 PARD3BQ8TEW8 1205 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 TMEM174Q8WUU8 243 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 DEPDC1BQ8WUY9 529 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 ATOH1Q92858 354 aaPredicted RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 DNASE1L2Q92874 299 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 MYLPFQ96A32 169 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 MMS19Q96T76 1030 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 SYT15Q9BQS2 421 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 TRMT61BQ9BVS5 477 aaKnown RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 SLC46A2Q9BY10 475 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 GPR88Q9GZN0 384 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 SDCBP2Q9H190 292 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 DPEP3Q9H4B8 488 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 TASP1Q9H6P5 420 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 SMYD3Q9H7B4 428 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 ABCB6Q9NP58 842 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 HEBP1Q9NRV9 189 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 NXF1Q9UBU9 619 aaKnown RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 CDH9Q9ULB4 789 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 MAGED2Q9UNF1 606 aaPredicted RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 TRAF3IP3Q9Y228 551 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 SIT1Q9Y3P8 196 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 R3HCC1Q9Y3T6 440 aaKnown RBP5.79□□□□□ -1.48
CHD3-212ENST00000570758 COL4A2P08572 1712 aa5.79□□□□□ -1.48
CHD3-212ENST00000570758 CLDN5O00501 218 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 ZNF263O14978 683 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 TACC1O75410 805 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms