RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 BMT2Q1RMZ1 405 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 SLC44A4Q53GD3 710 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 STXBP5Q5T5C0 1151 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 GAREM2Q75VX8 874 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 METTL23Q86XA0 190 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 PDCL2Q8N4E4 241 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 ZSCAN18Q8TBC5 510 aaPredicted RBP16.23■□□□□ 0.19
RAB40B-203ENST00000570676 NOC3LQ8WTT2 800 aaKnown RBP16.23■□□□□ 0.19
RAB40B-203ENST00000570676 DNASE1L2Q92874 299 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 DHTKD1Q96HY7 919 aaPredicted RBP16.23■□□□□ 0.19
RAB40B-203ENST00000570676 SHDQ96IW2 340 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 LPIN3Q9BQK8 851 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 MKNK1Q9BUB5 465 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 NAT10Q9H0A0 1025 aaKnown RBP16.23■□□□□ 0.19
RAB40B-203ENST00000570676 TRPV4Q9HBA0 871 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 ZFP14Q9HCL3 533 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 INTS13Q9NVM9 706 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 CTNND2Q9UQB3 1225 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 SIT1Q9Y3P8 196 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 ASB3Q9Y575 518 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 GREB1Q4ZG55 1949 aa16.23■□□□□ 0.19
RAB40B-203ENST00000570676 TMEM191BP0C7N4 346 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 BFSP1Q12934 665 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 PAK1Q13153 545 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 KNOP1Q1ED39 458 aaKnown RBP16.22■□□□□ 0.19
RAB40B-203ENST00000570676 CT47A1Q5JQC4 288 aaPredicted RBP16.22■□□□□ 0.19
RAB40B-203ENST00000570676 DNAJB7Q7Z6W7 309 aaPredicted RBP16.22■□□□□ 0.19
RAB40B-203ENST00000570676 THEM5Q8N1Q8 247 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 OR5B17Q8NGF7 314 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 SPPL2BQ8TCT7 592 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 C2orf15Q8WU43 125 aaKnown RBP16.22■□□□□ 0.19
RAB40B-203ENST00000570676 CACTINQ8WUQ7 758 aaKnown RBP16.22■□□□□ 0.19
RAB40B-203ENST00000570676 NELFBQ8WX92 580 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 RSPRY1Q96DX4 576 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 PKMYT1Q99640 499 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 SEPT5Q99719 369 aaPredicted RBP16.22■□□□□ 0.19
RAB40B-203ENST00000570676 LTB4R2Q9NPC1 389 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 AGPAT3Q9NRZ7 376 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 TMLHEQ9NVH6 421 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 GDAP2Q9NXN4 497 aa16.22■□□□□ 0.19
RAB40B-203ENST00000570676 GFRA3O60609 400 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 HAPLN1P10915 354 aaPredicted RBP16.21■□□□□ 0.19
RAB40B-203ENST00000570676 ERCC5P28715 1186 aaPredicted RBP16.21■□□□□ 0.19
RAB40B-203ENST00000570676 VIPR2P41587 438 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 ZNF165P49910 485 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 SMARCB1Q12824 385 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 MGAT5BQ3V5L5 792 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 TPRG1Q6ZUI0 275 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 OSTM1Q86WC4 334 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 CSGALNACT2Q8N6G5 542 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 DEPDC1BQ8WUY9 529 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 GPR88Q9GZN0 384 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 IL21Q9HBE4 155 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 HEBP1Q9NRV9 189 aa16.21■□□□□ 0.19
RAB40B-203ENST00000570676 ABI2Q9NYB9 513 aaPredicted RBP16.21■□□□□ 0.19
RAB40B-203ENST00000570676 MTF2Q9Y483 593 aaPredicted RBP16.21■□□□□ 0.19
RAB40B-203ENST00000570676 ANAPC1Q9H1A4 1944 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 ZNF233A6NK53 670 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 HCRTO43612 131 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 CAVIN2O95810 425 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 KRT19P08727 400 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 PSMC3P17980 439 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 CD72P21854 359 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 CCNE1P24864 410 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 TARSP26639 723 aaKnown RBP16.2■□□□□ 0.18
RAB40B-203ENST00000570676 GABRR2P28476 465 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 TUFMP49411 452 aaKnown RBP16.2■□□□□ 0.18
RAB40B-203ENST00000570676 STX17P56962 302 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 RBP5P82980 135 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 CCDC142Q17RM4 750 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 INTS6LQ5JSJ4 861 aaKnown RBP16.2■□□□□ 0.18
RAB40B-203ENST00000570676 LIMS2Q7Z4I7 341 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 FRMD5Q7Z6J6 570 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 ITIH5Q86UX2 942 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 WDR49Q8IV35 697 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 DCP1BQ8IZD4 617 aaKnown RBP16.2■□□□□ 0.18
RAB40B-203ENST00000570676 TMEM86AQ8N2M4 240 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 SPATA18Q8TC71 538 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 ANKRD36BP1Q96IX9 119 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 TSG101Q99816 390 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 TRMT61BQ9BVS5 477 aaKnown RBP16.2■□□□□ 0.18
RAB40B-203ENST00000570676 OSBPL6Q9BZF3 934 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 KCTD10Q9H3F6 313 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 SLITRK6Q9H5Y7 841 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 DDX43Q9NXZ2 648 aaKnown RBP16.2■□□□□ 0.18
RAB40B-203ENST00000570676 RWDD2AQ9UIY3 292 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 SNX9Q9Y5X1 595 aa16.2■□□□□ 0.18
RAB40B-203ENST00000570676 ZNF638Q14966 1978 aaKnown RBP16.2■□□□□ 0.18
RAB40B-203ENST00000570676 HELZP42694 1942 aaKnown RBP16.19■□□□□ 0.18
RAB40B-203ENST00000570676 CACNA1IQ9P0X4 2223 aa16.19■□□□□ 0.18
RAB40B-203ENST00000570676 BICDL2A1A5D9 508 aa16.19■□□□□ 0.18
RAB40B-203ENST00000570676 PRR23AA6NEV1 266 aa16.19■□□□□ 0.18
RAB40B-203ENST00000570676 HEPACAM2A8MVW5 462 aa16.19■□□□□ 0.18
RAB40B-203ENST00000570676 TULP1O00294 542 aaPredicted RBP16.19■□□□□ 0.18
RAB40B-203ENST00000570676 ARNTLO00327 626 aa16.19■□□□□ 0.18
RAB40B-203ENST00000570676 GABRDO14764 452 aa16.19■□□□□ 0.18
RAB40B-203ENST00000570676 CLIC2O15247 247 aa16.19■□□□□ 0.18
RAB40B-203ENST00000570676 HUS1O60921 280 aa16.19■□□□□ 0.18
RAB40B-203ENST00000570676 ACAT1P24752 427 aaKnown RBP16.19■□□□□ 0.18
RAB40B-203ENST00000570676 GPR15P49685 360 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms