RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 FKBP3Q00688 224 aaKnown RBP11.92□□□□□ -0.5
SMG6-206ENST00000570668 LRRC63Q05C16 580 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 STIM1Q13586 685 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 VEPH1Q14D04 833 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 SGSM1Q2NKQ1 1148 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 ZNF699Q32M78 642 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 ZNF667Q5HYK9 610 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 ANKRD40Q6AI12 368 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 PARM1Q6UWI2 310 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 CLEC17AQ6ZS10 378 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 TAF4BQ92750 862 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 PBXIP1Q96AQ6 731 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 MCRS1Q96EZ8 462 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 EEF2KMTQ96G04 330 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 DHTKD1Q96HY7 919 aaPredicted RBP11.92□□□□□ -0.5
SMG6-206ENST00000570668 FUBP3Q96I24 572 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMG6-206ENST00000570668 TSG101Q99816 390 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 SYT15Q9BQS2 421 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 MRPL45Q9BRJ2 306 aaKnown RBP11.92□□□□□ -0.5
SMG6-206ENST00000570668 RPP25Q9BUL9 199 aaKnown RBP11.92□□□□□ -0.5
SMG6-206ENST00000570668 NXF1Q9UBU9 619 aaKnown RBP11.92□□□□□ -0.5
SMG6-206ENST00000570668 NME7Q9Y5B8 376 aa11.92□□□□□ -0.5
SMG6-206ENST00000570668 PSMA7O14818 248 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 NARSO43776 548 aaKnown RBP11.91□□□□□ -0.5
SMG6-206ENST00000570668 ATP2C2O75185 946 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 ASS1P00966 412 aaKnown RBP11.91□□□□□ -0.5
SMG6-206ENST00000570668 PDGFRBP09619 1106 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 TRIM49P0CI25 452 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 TRIM49CP0CI26 452 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 EPB41P11171 864 aaKnown RBP11.91□□□□□ -0.5
SMG6-206ENST00000570668 SRFP11831 508 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
SMG6-206ENST00000570668 CCNE1P24864 410 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 GTF2H1P32780 548 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 GCLMP48507 274 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 PPP3CAQ08209 521 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 MORC3Q14149 939 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 MAPRE1Q15691 268 aaKnown RBP11.91□□□□□ -0.5
SMG6-206ENST00000570668 CCDC142Q17RM4 750 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 ISM2Q6H9L7 571 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 FOXR2Q6PJQ5 311 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 C4orf50Q6ZRC1 276 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 SPATA2LQ8IUW3 424 aaPredicted RBP11.91□□□□□ -0.5
SMG6-206ENST00000570668 SHKBP1Q8TBC3 707 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 FAM200AQ8TCP9 573 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 LPIN3Q9BQK8 851 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 PI4K2AQ9BTU6 479 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 GPR88Q9GZN0 384 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 SNX25Q9H3E2 840 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 ZNF334Q9HCZ1 680 aaPredicted RBP11.91□□□□□ -0.5
SMG6-206ENST00000570668 CRTAC1Q9NQ79 661 aa11.91□□□□□ -0.5
SMG6-206ENST00000570668 WDFY4Q6ZS81 3184 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 A0A1W2PRU2 124 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 TRIM49BA6NDI0 452 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 SLC16A3O15427 465 aaKnown RBP11.9□□□□□ -0.5
SMG6-206ENST00000570668 ECI2O75521 394 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 FGF19O95750 216 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 HLA-DRAP01903 254 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 P4HA1P13674 534 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 HMGA1P17096 107 aaKnown RBP11.9□□□□□ -0.5
SMG6-206ENST00000570668 GJA1P17302 382 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 COL9A1P20849 921 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 CYP2F1P24903 491 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 PIK3CAP42336 1068 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 MAGEA11P43364 429 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 CDH8P55286 799 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 PSMC1P62191 440 aaKnown RBP11.9□□□□□ -0.5
SMG6-206ENST00000570668 RPL10AP62906 217 aaKnown RBP11.9□□□□□ -0.5
SMG6-206ENST00000570668 TEAD2Q15562 447 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 FAM78AQ5JUQ0 283 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 VSTM1Q6UX27 236 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 GAREM2Q75VX8 874 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 FBXL6Q8N531 539 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 TRIML1Q8N9V2 468 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 ST13P5Q8NFI4 369 aaPredicted RBP11.9□□□□□ -0.5
SMG6-206ENST00000570668 OR6B3Q8NGW1 331 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 MYCBPAPQ8TBZ2 947 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 TAS1R2Q8TE23 839 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 GIPC2Q8TF65 315 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 SMARCD2Q92925 531 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 MYLPFQ96A32 169 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 PCED1BQ96HM7 432 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 ZSWIM3Q96MP5 696 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 ASB16Q96NS5 453 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 SMYD3Q9H7B4 428 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 IL21Q9HBE4 155 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 TMEM8AQ9HCN3 771 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 SLC2A4RGQ9NR83 387 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 WNT16Q9UBV4 365 aa11.9□□□□□ -0.5
SMG6-206ENST00000570668 A8MXQ7 604 aa11.89□□□□□ -0.51
SMG6-206ENST00000570668 BIN1O00499 593 aa11.89□□□□□ -0.51
SMG6-206ENST00000570668 CSH1P0DML2 217 aa11.89□□□□□ -0.51
SMG6-206ENST00000570668 CSH2P0DML3 217 aa11.89□□□□□ -0.51
SMG6-206ENST00000570668 PTPN1P18031 435 aaKnown RBP11.89□□□□□ -0.51
SMG6-206ENST00000570668 FCARP24071 287 aa11.89□□□□□ -0.51
SMG6-206ENST00000570668 GABRR2P28476 465 aa11.89□□□□□ -0.51
SMG6-206ENST00000570668 GPR15P49685 360 aa11.89□□□□□ -0.51
SMG6-206ENST00000570668 TAF12Q16514 161 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms