RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 GEMIN4P57678 1058 aaKnown RBP16.09■□□□□ 0.17
USP43-202ENST00000570475 ZACNQ401N2 412 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 NPNTQ6UXI9 565 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 NCAPG2Q86XI2 1143 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 TRIM50Q86XT4 487 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 RFWD2Q8NHY2 731 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 NAF1Q96HR8 494 aaKnown RBP16.09■□□□□ 0.17
USP43-202ENST00000570475 MFSD14AQ96MC6 490 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 SLITRK1Q96PX8 696 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 XPNPEP1Q9NQW7 623 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 RAB6BQ9NRW1 208 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 GJB1P08034 283 aa16.08■□□□□ 0.17
USP43-202ENST00000570475 CD48P09326 243 aa16.08■□□□□ 0.17
USP43-202ENST00000570475 SERPINB3P29508 390 aa16.08■□□□□ 0.17
USP43-202ENST00000570475 GDF10P55107 478 aa16.08■□□□□ 0.17
USP43-202ENST00000570475 PTK7Q13308 1070 aa16.08■□□□□ 0.17
USP43-202ENST00000570475 CRYMQ14894 314 aa16.08■□□□□ 0.17
USP43-202ENST00000570475 TFDP3Q5H9I0 405 aa16.08■□□□□ 0.17
USP43-202ENST00000570475 MANSC1Q9H8J5 431 aa16.08■□□□□ 0.17
USP43-202ENST00000570475 RNF19AQ9NV58 838 aa16.08■□□□□ 0.17
USP43-202ENST00000570475 G3BP2Q9UN86 482 aaKnown RBP16.08■□□□□ 0.17
USP43-202ENST00000570475 TOM1L1O75674 476 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 CALB1P05937 261 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 APRTP07741 180 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 FAM102AQ5T9C2 384 aaPredicted RBP16.08■□□□□ 0.16
USP43-202ENST00000570475 MON1BQ7L1V2 547 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 C12orf50Q8NA57 414 aaPredicted RBP16.08■□□□□ 0.16
USP43-202ENST00000570475 ZNF570Q96NI8 536 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 STRA6Q9BX79 667 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 SMYD3Q9H7B4 428 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 POLIQ9UNA4 740 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 LAMB2P55268 1798 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 MTA2O94776 668 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 PYGBP11216 843 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 CNTN2Q02246 1040 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 RCN1Q15293 331 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 TAF5Q15542 800 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 RHBDF2Q6PJF5 856 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 FAM13CQ8NE31 585 aa16.08■□□□□ 0.16
USP43-202ENST00000570475 AVENQ9NQS1 362 aaPredicted RBP16.08■□□□□ 0.16
USP43-202ENST00000570475 SMG5Q9UPR3 1016 aaKnown RBP16.08■□□□□ 0.16
USP43-202ENST00000570475 COPEO14579 308 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 FAM155BO75949 473 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 EGFRP00533 1210 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 TNNC2P02585 160 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 POLR2BP30876 1174 aaKnown RBP16.07■□□□□ 0.16
USP43-202ENST00000570475 VCPP55072 806 aaKnown RBP16.07■□□□□ 0.16
USP43-202ENST00000570475 MMRN1Q13201 1228 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 XKR3Q5GH77 459 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 NBPF12Q5TAG4 269 aaPredicted RBP16.07■□□□□ 0.16
USP43-202ENST00000570475 CGB2Q6NT52 195 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 C12orf56Q8IXR9 622 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 CEP120Q8N960 986 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 NETO2Q8NC67 525 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 CCDC110Q8TBZ0 833 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 ZNF541Q9H0D2 1346 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 BHMG1C9JSJ3 638 aaPredicted RBP16.07■□□□□ 0.16
USP43-202ENST00000570475 GARTP22102 1010 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 GLRA2P23416 452 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 PTGER2P43116 358 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 POLE2P56282 527 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 NR1H3Q13133 447 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 MAPK6Q16659 721 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 KATNAL2Q8IYT4 538 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 SLC25A41Q8N5S1 370 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 JOSD2Q8TAC2 188 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 SLC38A10Q9HBR0 1119 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 KLRG2A4D1S0 409 aaPredicted RBP16.07■□□□□ 0.16
USP43-202ENST00000570475 M0QYV0 167 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 TBXAS1P24557 533 aaPredicted RBP16.07■□□□□ 0.16
USP43-202ENST00000570475 ELK3P41970 407 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 ALDH18A1P54886 795 aaKnown RBP16.07■□□□□ 0.16
USP43-202ENST00000570475 ZRSR2Q15696 482 aaKnown RBP16.07■□□□□ 0.16
USP43-202ENST00000570475 SPDYE2Q495Y8 402 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 FNBP1LQ5T0N5 605 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 SLFN12LQ6IEE8 588 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 TRIM72Q6ZMU5 477 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 AGR3Q8TD06 166 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 TRAPPC12Q8WVT3 735 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 DLGAP2Q9P1A6 1054 aa16.07■□□□□ 0.16
USP43-202ENST00000570475 H3BRJ5 948 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 VNN1O95497 513 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 UNC45BQ8IWX7 931 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 AGGF1Q8N302 714 aaeCLIP16.06■□□□□ 0.16
USP43-202ENST00000570475 ARMC2Q8NEN0 867 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 PRPF31Q8WWY3 499 aaKnown RBP16.06■□□□□ 0.16
USP43-202ENST00000570475 CCDC124Q96CT7 223 aaKnown RBP16.06■□□□□ 0.16
USP43-202ENST00000570475 MECRQ9BV79 373 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 TCRBV7S3A2A0A539 114 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 TTLL13PA6NNM8 815 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 TXNDC9O14530 226 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 HSPA1LP34931 641 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 OGDHQ02218 1023 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 ZNF568Q3ZCX4 644 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 C6orf163Q5TEZ5 329 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 MROH9Q5TGP6 573 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 RFWD3Q6PCD5 774 aa16.06■□□□□ 0.16
USP43-202ENST00000570475 ARID3BQ8IVW6 561 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms