RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 TYMPP19971 482 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 ITPKAP23677 461 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 PSMA5P28066 241 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 LRPAP1P30533 357 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 P2RY2P41231 377 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 TUFMP49411 452 aaKnown RBP11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 ATXN3P54252 364 aaPredicted RBP11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 PEX3P56589 373 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 NLRP12P59046 1061 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 VEPH1Q14D04 833 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 ZBTB6Q15916 424 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 TAF12Q16514 161 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 CRY1Q16526 586 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 MGAT5BQ3V5L5 792 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 PEAR1Q5VY43 1037 aaPredicted RBP11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 TXNDC8Q6A555 127 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 MPZL3Q6UWV2 235 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 DSTYKQ6XUX3 929 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 RUFY3Q7L099 469 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 TTC30AQ86WT1 665 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 CCDC33Q8N5R6 958 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 PNPLA1Q8N8W4 532 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 OR2I1PQ8NGU4 316 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 OR10T2Q8NGX3 314 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 KIFAP3Q92845 792 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 CAMK1GQ96NX5 476 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 GTPBP2Q9BX10 602 aaKnown RBP11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 TMEM60Q9H2L4 133 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 TMEM134Q9H6X4 195 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 DUS2Q9NX74 493 aaKnown RBP11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 MMP17Q9ULZ9 603 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 SLC6A14Q9UN76 642 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 MAP3K13O43283 966 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 OPHN1O60890 802 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 FTH1P19P0C7X4 201 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 HMGA1P17096 107 aaKnown RBP11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 DDX6P26196 483 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 RPA1P27694 616 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 NPTX2P47972 431 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 GUCY2FP51841 1108 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 SEC13P55735 322 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 DMP1Q13316 513 aaPredicted RBP11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 HNRNPDQ14103 355 aaKnown RBP11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 ZNF268Q14587 947 aaPredicted RBP11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 MTF1Q14872 753 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 TRIP6Q15654 476 aaKnown RBP11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 EML3Q32P44 896 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 SLC39A12Q504Y0 691 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 LYSMD4Q5XG99 296 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 ARMCX5Q6P1M9 558 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 MON1AQ86VX9 555 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 SKAP1Q86WV1 359 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 OSCP1Q8WVF1 389 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 CAPN10Q9HC96 672 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 ARHGAP28Q9P2N2 729 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 WNT6Q9Y6F9 365 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 GOLGA4Q13439 2230 aaKnown RBP11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 KALRNO60229 2985 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 STK36Q9NRP7 1315 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 TENM4Q6N022 2769 aa11.33□□□□□ -0.6
CTDNEP1-202ENST00000570380 PPEF2O14830 753 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 SH3BP5O60239 455 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 CXCL8P10145 99 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 HAPLN1P10915 354 aaPredicted RBP11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 KRT2P35908 639 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 OPRD1P41143 372 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 DPP6P42658 865 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 IFNAR2P48551 515 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 LILRA4P59901 499 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 GFPT1Q06210 699 aaPredicted RBP11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 C19orf57Q0VDD7 668 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 ZNF77Q15935 545 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 ECM1Q16610 540 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 DUOXA1Q1HG43 343 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 MAP7D1Q3KQU3 841 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 DAW1Q8N136 415 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 MINDY1Q8N5J2 469 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 CCDC26Q8TAB7 109 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 CRELD1Q96HD1 420 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 SPACA7Q96KW9 195 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 ZCWPW1Q9H0M4 648 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 BHMT2Q9H2M3 363 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 ZSWIM6Q9HCJ5 1215 aa11.32□□□□□ -0.6
CTDNEP1-202ENST00000570380 TTC26A0AVF1 554 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 CDC45O75419 566 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 C1QL1O75973 258 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 ALDH1A2O94788 518 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 SERPINF2P08697 491 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 CYP3A5P20815 502 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 HOXD12P35452 270 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 FAM160A1Q05DH4 1040 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 SCRN1Q12765 414 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 SPDYCQ5MJ68 293 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 LRRTM3Q86VH5 581 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 STKLD1Q8NE28 680 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 TTC16Q8NEE8 873 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms