RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 MAP7D1Q3KQU3 841 aa19.65■□□□□ 0.74
CLK3-227ENST00000570296 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
CLK3-227ENST00000570296 OVOS1Q6IE37 1185 aa19.65■□□□□ 0.74
CLK3-227ENST00000570296 ARMCX5Q6P1M9 558 aa19.65■□□□□ 0.74
CLK3-227ENST00000570296 PIK3AP1Q6ZUJ8 805 aa19.65■□□□□ 0.74
CLK3-227ENST00000570296 GLRX5Q86SX6 157 aa19.65■□□□□ 0.74
CLK3-227ENST00000570296 NAXDQ8IW45 347 aa19.65■□□□□ 0.74
CLK3-227ENST00000570296 IFT74Q96LB3 600 aa19.65■□□□□ 0.74
CLK3-227ENST00000570296 SEPT5Q99719 369 aaPredicted RBP19.65■□□□□ 0.74
CLK3-227ENST00000570296 ACO2Q99798 780 aaKnown RBP19.65■□□□□ 0.74
CLK3-227ENST00000570296 DUS2Q9NX74 493 aaKnown RBP19.65■□□□□ 0.74
CLK3-227ENST00000570296 KIAA1522Q9P206 1035 aaPredicted RBP19.65■□□□□ 0.74
CLK3-227ENST00000570296 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.65■□□□□ 0.74
CLK3-227ENST00000570296 K7EQS6 105 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 K7ERI5 159 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 AP5Z1O43299 807 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 GJB3O75712 270 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 TYMPP19971 482 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 HSPA4P34932 840 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 ABCG1P45844 678 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 SEC13P55735 322 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 NR1H3Q13133 447 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 NBR1Q14596 966 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 TMEM92Q6UXU6 159 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 TMPRSS7Q7RTY8 843 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 TMEM150AQ86TG1 271 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 CCDC33Q8N5R6 958 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 OR2I1PQ8NGU4 316 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 TTC12Q9H892 705 aaPredicted RBP19.64■□□□□ 0.73
CLK3-227ENST00000570296 KCNJ14Q9UNX9 436 aa19.64■□□□□ 0.73
CLK3-227ENST00000570296 J3QKU1 62 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 SPATA31C1P0DKV0 1188 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 HNRNPLP14866 589 aaKnown RBP eCLIP19.63■□□□□ 0.73
CLK3-227ENST00000570296 IFNAR2P48551 515 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 NLRP12P59046 1061 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 MRPS21P82921 87 aaKnown RBP19.63■□□□□ 0.73
CLK3-227ENST00000570296 BLOC1S2Q6QNY1 142 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 PADI6Q6TGC4 694 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 MON1AQ86VX9 555 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 ZNF843Q8N446 348 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 FRMD1Q8N878 549 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 AIFM3Q96NN9 605 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 TUFT1Q9NNX1 390 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 BCCIPQ9P287 314 aaKnown RBP eCLIP19.63■□□□□ 0.73
CLK3-227ENST00000570296 TUBGCP4Q9UGJ1 667 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 COL6A6A6NMZ7 2263 aa19.63■□□□□ 0.73
CLK3-227ENST00000570296 PHLPP2Q6ZVD8 1323 aa19.62■□□□□ 0.73
CLK3-227ENST00000570296 F11P03951 625 aa19.62■□□□□ 0.73
CLK3-227ENST00000570296 LRPAP1P30533 357 aa19.62■□□□□ 0.73
CLK3-227ENST00000570296 CYP4F3Q08477 520 aa19.62■□□□□ 0.73
CLK3-227ENST00000570296 CALCRLQ16602 461 aa19.62■□□□□ 0.73
CLK3-227ENST00000570296 EML3Q32P44 896 aa19.62■□□□□ 0.73
CLK3-227ENST00000570296 MGAT5BQ3V5L5 792 aa19.62■□□□□ 0.73
CLK3-227ENST00000570296 HSF5Q4G112 596 aaPredicted RBP19.62■□□□□ 0.73
CLK3-227ENST00000570296 SLCO6A1Q86UG4 719 aa19.62■□□□□ 0.73
CLK3-227ENST00000570296 MRPL4Q9BYD3 311 aaKnown RBP19.62■□□□□ 0.73
CLK3-227ENST00000570296 TSC2P49815 1807 aa19.62■□□□□ 0.73
CLK3-227ENST00000570296 HELZP42694 1942 aaKnown RBP19.61■□□□□ 0.73
CLK3-227ENST00000570296 PTPN13Q12923 2485 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 ARHGEF35A5YM69 484 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 CPLX1O14810 134 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 PROZP22891 400 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 NMT1P30419 496 aaKnown RBP19.61■□□□□ 0.73
CLK3-227ENST00000570296 FAM160A1Q05DH4 1040 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 ZNF77Q15935 545 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 TXNDC8Q6A555 127 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 DSTYKQ6XUX3 929 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 SLC36A4Q6YBV0 504 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 MRPS31Q92665 395 aaKnown RBP19.61■□□□□ 0.73
CLK3-227ENST00000570296 KIFAP3Q92845 792 aa19.61■□□□□ 0.73
CLK3-227ENST00000570296 JAKMIP1Q96N16 626 aaKnown RBP19.61■□□□□ 0.73
CLK3-227ENST00000570296 MYO18AQ92614 2054 aaKnown RBP19.6■□□□□ 0.73
CLK3-227ENST00000570296 CBFA2T3O75081 653 aa19.6■□□□□ 0.73
CLK3-227ENST00000570296 RPL6Q02878 288 aaKnown RBP19.6■□□□□ 0.73
CLK3-227ENST00000570296 USP4Q13107 963 aa19.6■□□□□ 0.73
CLK3-227ENST00000570296 MPZL3Q6UWV2 235 aa19.6■□□□□ 0.73
CLK3-227ENST00000570296 CATSPER3Q86XQ3 398 aa19.6■□□□□ 0.73
CLK3-227ENST00000570296 LURAP1LQ8IV03 231 aa19.6■□□□□ 0.73
CLK3-227ENST00000570296 GIPC2Q8TF65 315 aa19.6■□□□□ 0.73
CLK3-227ENST00000570296 C2orf15Q8WU43 125 aaKnown RBP19.6■□□□□ 0.73
CLK3-227ENST00000570296 TCHPQ9BT92 498 aa19.6■□□□□ 0.73
CLK3-227ENST00000570296 WNT6Q9Y6F9 365 aa19.6■□□□□ 0.73
CLK3-227ENST00000570296 KNTC1P50748 2209 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 ANK1P16157 1881 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 A0A1W2PQD8 194 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 TRABD2BA6NFA1 517 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 CAPN8A6NHC0 703 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 ABLIM1O14639 778 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 HMGA1P17096 107 aaKnown RBP19.59■□□□□ 0.73
CLK3-227ENST00000570296 RPS6KB1P23443 525 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 OPRD1P41143 372 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 TXKP42681 527 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 ZNF33AQ06730 810 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 SLC10A6Q3KNW5 377 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 SLC39A12Q504Y0 691 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 ALLCQ8N6M5 410 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 TXNDC5Q8NBS9 432 aaKnown RBP19.59■□□□□ 0.73
CLK3-227ENST00000570296 PIP4K2CQ8TBX8 421 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 HMGB4Q8WW32 186 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 KCNB2Q92953 911 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms